| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003038 |
|---|
| Symbol | |
|---|
| ID | 8556768 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | + |
|---|
| Start bp | 1592376 |
|---|
| End bp | 1594487 |
|---|
| Gene Length | 2112 bp |
|---|
| Protein Length | 703 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 646406131 |
|---|
| Product | membrane protein suppressor for copper-sensitivity ScsB |
|---|
| Protein accession | YP_003285665 |
|---|
| Protein GI | 262393811 |
|---|
| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG4232] Thiol:disulfide interchange protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCAAA TTACCAAACT GACTCAGTTC GCGTCTATGT TCTTTATGAC GCTGGCTTTG
AGTTTGTTCT CTCTGAATAT TTCAGCACAA ACTACCGATA CCGGTTGGAT GACCAATCCA
CAACATCCTC CAGTGCAAAC GCGCTTTGTA CTAACGGGTC AACAAGATCC GCAAGCCAAA
ACACTTACAG GTTATTTGGA TGTCAAGTTA ACCGGAGACT GGAAAACTTA CTGGCGATCG
CCGGGCGAGG GTGGTGTCGC GCCATCGATA GATTGGCAAA ACTCGCAAAA CCTGAGCAAG
GTTGATTGGC AATGGCCATA TCCGCAAAAG TTCGAGTTAT TGGGCATTGA GACTCTCGGT
TACAAAGGCG ACACTTTGTT CCCAATGACG CTGCATATCG ACGATATGTC GAAACCCGTC
ACGATTGATG CAGTGCTCAC GCTTTCTTCC TGTACTACGA TTTGTGTGCT GACGGACTAC
CAAATTCAAT TGACGTTCTT ACCCTCTGAG CTGAAAGTGG ACGAAGACGT GATGTTCAGT
TACGCCCAAG CGGTGAGTAA TGTTCCTCAA TCTTCGCCTT TTGTTGAGGT CACGCAAACA
AATTGGGATG AGACTCAATC CAAATTACAA ATCAAACTAA AGAACACGCA AGGTTGGCAA
AATCCTCAAG TGTTGGTGGA TGGTGTTGGT GATGCGATTC GTGACTACAG CTTCAAGTTG
GATGGACTTC AGCAAGAAGG TGATATCGTC ACAGCAAATT ACTCGGTTGA TACCTGGCTG
GGTGAGGTAG AGCTTAATGA ACAATCGTTA TATGTTTCCA TCAAAGATGA TAACTTGCTG
GTCGAAGAGG TAACACAAGC ACAAGCAGGA TCGGTTACAT CGTCACTGCC AACTACCTCT
TTAGCGAGTA TTTTCTTATT TGCACTGTTA GGCGGTTTGA TCTTGAACAT CATGCCGTGT
GTGCTGCCTG TATTGGGGAT GAAGCTCAGC AGTATTGTGG CTGCGCATGG TGTAGAGCGC
CGTCAAATTC GTACCCAGTT TATCGCTTCT TCTCTGGGGA TTCTCACTTC GTTCTGGCTG
ATAGCTGGAT TCATTTTGGT GTTGAAGCTT ACGGGTAACG AGATCGGTTG GGGCGTGCAG
TTCCAAAGCC CTTGGTTCCT AGGATTGATG GTACTAGTCA CTGCTTTGTT CGGCGCCAAT
ATGTTGGGGT TATTTGAAAT CCGTCTGTCA TCGGGTACCA ATACATGGCT CGCATCGAAA
GGTGATAACT CTCTAGTGGG TCACTACGTT CAAGGTATGT TCGCCACTTT GCTTGCGACA
CCTTGTTCCG CACCGTTTTT AGGCACTGCC GTTGCTTTTG CCTTGGGCGC GGACGTATTA
ACGTTATTTG CAACCTTTAC TGCATTAGCA TTGGGTATGG CACTGCCTTG GATCTTAGTC
GCTGTGTTTC CAAGTGTCGC GCTGAAACTA CCTAAGCCCG GTCCATGGAT GAATGTCGTT
AAGATCGTGT TTGGCATAAT GATGTTGGCA ACCAGCGTTT GGCTACTTTC ATTAATGGCA
AATCATGTAC CGATGTTATG GATTGCACTC ATCGCTGTGG TTGCTTTTGT CGTCATGATG
GCAAGAATTA AGCGTGTGTA TGGTGAGAAA GCACTTGCTG TATCGGGGAC CGCATCGTTA
GTGTTGATAG CTGGAGGCTT ACTACTTGGC AGTGTCACTG CTGACCAATG GGCAACGCCA
CTTCCGGATG ATCTAGCTTG GCAAAAGCTT TCTAATTCAG CGATTGAAGA GCACGTCAAT
AATGGGCGAG TGGTGTTTGT GGATGTGACT GCGGATTGGT GTGTCACGTG TAAAGCGAAC
AAGATCGGCG TGATCTGGCA AGATCCTGTC TACTCATTGC TGCAAAGCCC TAATGTGGCG
ACGTTAAAAG GGGATTGGAC ACATCCGGAC GGCTCGGTAA CGGACTTTTT ACGAGCTCAT
GGGCGTTACG GTGTGCCGTT CAACATCGTC TATGGCCCGG CGGCGCCACA AGGTATCCCG
TTACCTGTGA TTCTGACTGA TGATGTTGTT TTAAGCGCGG TGAAACAAGC GAGTGGAGGA
TCCATTCAAT GA
|
|---|
| Protein sequence | MNQITKLTQF ASMFFMTLAL SLFSLNISAQ TTDTGWMTNP QHPPVQTRFV LTGQQDPQAK
TLTGYLDVKL TGDWKTYWRS PGEGGVAPSI DWQNSQNLSK VDWQWPYPQK FELLGIETLG
YKGDTLFPMT LHIDDMSKPV TIDAVLTLSS CTTICVLTDY QIQLTFLPSE LKVDEDVMFS
YAQAVSNVPQ SSPFVEVTQT NWDETQSKLQ IKLKNTQGWQ NPQVLVDGVG DAIRDYSFKL
DGLQQEGDIV TANYSVDTWL GEVELNEQSL YVSIKDDNLL VEEVTQAQAG SVTSSLPTTS
LASIFLFALL GGLILNIMPC VLPVLGMKLS SIVAAHGVER RQIRTQFIAS SLGILTSFWL
IAGFILVLKL TGNEIGWGVQ FQSPWFLGLM VLVTALFGAN MLGLFEIRLS SGTNTWLASK
GDNSLVGHYV QGMFATLLAT PCSAPFLGTA VAFALGADVL TLFATFTALA LGMALPWILV
AVFPSVALKL PKPGPWMNVV KIVFGIMMLA TSVWLLSLMA NHVPMLWIAL IAVVAFVVMM
ARIKRVYGEK ALAVSGTASL VLIAGGLLLG SVTADQWATP LPDDLAWQKL SNSAIEEHVN
NGRVVFVDVT ADWCVTCKAN KIGVIWQDPV YSLLQSPNVA TLKGDWTHPD GSVTDFLRAH
GRYGVPFNIV YGPAAPQGIP LPVILTDDVV LSAVKQASGG SIQ
|
|---|
| |