| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003024 |
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| Symbol | |
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| ID | 8556754 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 1574929 |
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| End bp | 1575630 |
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| Gene Length | 702 bp |
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| Protein Length | 233 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 646406117 |
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| Product | orotidine 5'-phosphate decarboxylase |
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| Protein accession | YP_003285651 |
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| Protein GI | 262393797 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
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| TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000599953 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATCGACC AAAAAGTTAT TGTCGCACTG GATTATGATA ACCAAGCAGA CGCACTTGCG
TTTGTAGATA GAATTGATCC TGCGTCATGT CGCCTAAAAG TTGGCAAGGA AATGTTTACG
CTATTTGGTC CTGATTTCGT ACGTGAACTC CACAAACGTG GTTTCTCAGT CTTCTTGGAT
TTGAAATTTC ACGATATTCC AAATACGTGT TCTAAGGCGG TCCGCGCAGC CGCGGAATTA
GGGGTTTGGA TGGTTAATGT GCATGCGAGC GGTGGTGAGC GCATGATGAC GGCATCACGT
GAAATTCTTG AGCCATACGG TAAAGATCGC CCACTTCTGA TTGGAGTAAC GGTACTAACC
AGTATGGAAC AAAGTGATTT AGCGGGTATT GGTTTGAACA TTGCGCCTCA GGATCAAGTT
ATTCGTCTGG CGACATTGAC CAAAAACGCT GGTTTAGATG GTGTCGTATG TTCAGCTCAA
GAGTCTTCAT TGCTTAAGAG CGAACTTGGT CAAGACTTTA AGTTAGTTAC ACCAGGAATC
CGACCTGCTG GCTCTGAGCA AGGTGACCAG CGCCGTATCA TGACACCAGT AGAGGCTATT
CAGTCAGGCT CTGACTATCT TGTTATTGGG CGTCCAATTA CTCAAGCTGT GGATCCTGCT
GCAGTGTTGA AATCGATCAA TGATAGCTTG TCTAGTATGT AA
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| Protein sequence | MIDQKVIVAL DYDNQADALA FVDRIDPASC RLKVGKEMFT LFGPDFVREL HKRGFSVFLD
LKFHDIPNTC SKAVRAAAEL GVWMVNVHAS GGERMMTASR EILEPYGKDR PLLIGVTVLT
SMEQSDLAGI GLNIAPQDQV IRLATLTKNA GLDGVVCSAQ ESSLLKSELG QDFKLVTPGI
RPAGSEQGDQ RRIMTPVEAI QSGSDYLVIG RPITQAVDPA AVLKSINDSL SSM
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