| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_003014 |
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| Symbol | |
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| ID | 8556744 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 1562532 |
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| End bp | 1565606 |
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| Gene Length | 3075 bp |
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| Protein Length | 1024 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 646406107 |
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| Product | DNA polymerase III alpha subunit |
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| Protein accession | YP_003285641 |
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| Protein GI | 262393787 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.693678 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTACG CGGAACTATT TTGTCAGTCT AACTTCTCTT TTTTGACTGG GGCTTCTCAT
GCAGAAGAAC TGGTACTCCA AGCTGCTTTC TATCGCTATC AAGCTCTAGC CATAACTGAT
GAATGTTCGG TCGCGGGCGT TGTCAAAGCC CATGCGACCA TCGAACAACA TAAACTCGAT
ATCAAACAAA TCGTTGGAAG TATGTTTTGG TTAAATGATG AATGCCAAAT CGTACTGCTT
TGCCCTTGTC GCAAGGCTTA TGCCGAGTTG TGTCGTATCA TCACAAACGC AAGAAGACGA
AGTGAAAAAG GCAACTATCA ACTGTTCGAA TGGGATTTGA TGTCGATTCG ACATTGCTTG
GTATTGTGGC TGCCCACACA TCAAGAGAGT GACCACTATT GGGGACGCTG GCTCAATCAA
CACCACGCTA ATCGTTTGTG GGTAGCGATT CAGCGCCATT TGAGTAACAA CGATACTGAG
TACATTGCGC ACTGCGAGCA GTTAGCACAT GAATTTCAAT TACCTATAAC TGCCTGCGGA
GGCGTTCTCA TGCATGATGT TGAACGCTTG CCATTACAGC ATGTACTTAC CGCTATAAAG
CATCGGTGTA GCGTCGATAA ACTCGGTTTT GATCGTATTT CGAATACAGA ACGAGCGCTT
CGTCCTTTTA AAAAATTGGT TCGGATTTAC AAACCAGAAT GGCTGGAAGA AAGTACCTAC
ATCGCCGATT TATGCGAGTT TAAGCTCTCC GATTTAAAAT ACGAATATCC TACCGAGCTG
ATCCCAGATG GTTATACACC CGACTCTTAC TTACGTATGT TAGTCGAGCG TGGTAAAAAG
CTGCGTTTTC CTGAAGGCGT GCCAGCAGAA GTCAATCAAA CCATCGAGAA TGAACTTGCG
CTTATTCAAG AGCTGAAATA CCACTACTAC TTCCTTACCA TCCACGACAT CGTAATGTTC
GCGAAACAAC AAGGCATTCT TTACCAAGGT CGAGGTTCCG CCGCAAACTC TGTGGTGTGC
TATTGCCTGG AAATTACCGC CGTCGACCCT CGACAAATCG CAGTCTTATT CGAACGATTT
ATCAGTAAAG AACGTAAGGA ACCGCCGGAT ATTGATGTGG ACTTTGAACA CGAGCGCCGT
GAAGAGGTTA TCCAATATAT TTACAAAAAA TATGGCCGTG AGCGTGCAGC ACTTTCTGCA
ACAGTGATCA GCTATCGCTT TAAAAGTGCC GTGCGTGAAG TCGGTAAAGC GCTAGGGATT
GAAGAGACCC AACTAGATTT TTTCATTAAG AACGTTAATC GCCGAGATCG CAGCCAAGGC
TGGCAAGCTC AAGTTATTGA ACTTGGCTTA CAACCAGAAT CTCTCAAAGG GCAGCAGTTT
ATCCAATTGG TCAACGAGAT CATTGGCTTC CCACGCCACT TATCTCAGCA CGTGGGTGGC
TTTGTAATTT CATCTGGCCC TTTATATGAG TTGGTACCTG TTGAAAATGC CTCGATGGAA
GATCGCACTA TCATTCAATG GGACAAAGAC GATTTAGAAA GCTTGAAGCT ATTAAAAGTC
GATGTGCTCG CACTCGGCAT GTTAAACGCC ATCAGAAAGT GCTTTCAACT GGTCGAGAAA
CACCACCAGC GATCCCTCTC GATTTCCGAG ATCACTCGCC GACAAGATGA TCCACACGTG
TACGGCATGA TCCAAAAAGC TGACACGATA GGCGTATTCC AAATTGAATC TCGTGCACAA
ATGAGCATGC TTCCTCGCCT AAAGCCTGCT TGTTATTACG ACTTAGTGAT TCAAATTGCA
ATTGTTCGTC CAGGCCCTAT TCAGGGTGAT ATGGTGCATC CTTTTTTAAA ACGACGAGAT
CAAAAAGAGC CAGTCAGTTA TCCATCGGAA GAAGTAAAAA GCGTTCTGGA GCGGACTATG
GGCGTCCCTA TTTTCCAAGA GCAAGTCATC AAGCTAGCCA TGGTAGCCGC AGGGTTTAGC
GGCGGCGAGG CCGATCAACT CCGTCGAGCG ATGGCATCAT GGAAAAAGAA TGGCGATCTC
GCTAAATTCA GGCCAAAATT GATCAATGGT ATGCAAGAGA GAGGTTATGA CTTAGCGTTT
GCTGAGCGCA TTTTCGATCA GATTTGCGGC TTTGGTGAGT ACGGCTTCCC TGAAAGTCAT
TCAGCGTCTT TCGCAGTGCT GGCATATTGT TCTGCATGGT TAAAATATTA TTACCCAGCC
GAATTTTACA CTGCATTGTT GAACAGCCAA CCAATGGGAT TTTATAGCCC ATCGCAATTA
GTACAAGATG CTCGCCGACA TGGCGTCGAA GTATTGCCGG TGTGCGTCAA TCATTCAAAA
TATCAACATC ATCTCGTCTC ACGTCCGAAT GGCAGGCTCG GCGTGCAACT TGGTTTTCGC
TTGGTGAAAG GCTTTAACGC AGAAAGCGCA CAAAGACTTA TTGAGCGCAA ACCACTTAAT
GGTTACCGAT CGATTCAAGA AGTAAAGCAG ATATTAAGAA GCCGAAGTGA CATTGAATTA
TTGGCTTCAG CCAATGCATT TCAGGCCTTA TCGGGGAATC GTTATAACGC ACGCTGGGCA
GCAATGGATT CCTTATCTGA CCTACCATTG TTTCACAAGG TCGAAGAACC CAGTGTTAGC
TATCAAACTC AGCCCTCAGA ATATGAAAAT TTAATTGAGG ATTACGCGAG CACGGGACTA
TCTCTTAGCC GCCACCCGAT TAAATTATTA GAAGAAACGG GCAAACTCCC TCATTTTACC
CGCATGAGGC AACTGGCAGA GAAACCGCAT AGGTCATTGG TCACAGTGGT AGGCGTGGTA
ACGGGAAGAC AATCTCCAGG CACCGCCGCT GGCGTGACAT TTTTTACGTT AGAAGATGAC
ACAGGCAACA TTAATGTGGT CGTTTGGCAA GCGACAGCAC GAGCCCAAAA GCAAGCGTAT
TTAGGCGCTA AAGTATTAAT GGTGAAAGGC ATTCTTGAAA GAGAGGGAGA AGTCACGCAC
GTTATTGCTG GCAAGTTGAT TGATTGCACG CACTATTTGA ATAATCTACA AAGTAAATCT
CGCGACTTTC ATTAG
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| Protein sequence | MSYAELFCQS NFSFLTGASH AEELVLQAAF YRYQALAITD ECSVAGVVKA HATIEQHKLD
IKQIVGSMFW LNDECQIVLL CPCRKAYAEL CRIITNARRR SEKGNYQLFE WDLMSIRHCL
VLWLPTHQES DHYWGRWLNQ HHANRLWVAI QRHLSNNDTE YIAHCEQLAH EFQLPITACG
GVLMHDVERL PLQHVLTAIK HRCSVDKLGF DRISNTERAL RPFKKLVRIY KPEWLEESTY
IADLCEFKLS DLKYEYPTEL IPDGYTPDSY LRMLVERGKK LRFPEGVPAE VNQTIENELA
LIQELKYHYY FLTIHDIVMF AKQQGILYQG RGSAANSVVC YCLEITAVDP RQIAVLFERF
ISKERKEPPD IDVDFEHERR EEVIQYIYKK YGRERAALSA TVISYRFKSA VREVGKALGI
EETQLDFFIK NVNRRDRSQG WQAQVIELGL QPESLKGQQF IQLVNEIIGF PRHLSQHVGG
FVISSGPLYE LVPVENASME DRTIIQWDKD DLESLKLLKV DVLALGMLNA IRKCFQLVEK
HHQRSLSISE ITRRQDDPHV YGMIQKADTI GVFQIESRAQ MSMLPRLKPA CYYDLVIQIA
IVRPGPIQGD MVHPFLKRRD QKEPVSYPSE EVKSVLERTM GVPIFQEQVI KLAMVAAGFS
GGEADQLRRA MASWKKNGDL AKFRPKLING MQERGYDLAF AERIFDQICG FGEYGFPESH
SASFAVLAYC SAWLKYYYPA EFYTALLNSQ PMGFYSPSQL VQDARRHGVE VLPVCVNHSK
YQHHLVSRPN GRLGVQLGFR LVKGFNAESA QRLIERKPLN GYRSIQEVKQ ILRSRSDIEL
LASANAFQAL SGNRYNARWA AMDSLSDLPL FHKVEEPSVS YQTQPSEYEN LIEDYASTGL
SLSRHPIKLL EETGKLPHFT RMRQLAEKPH RSLVTVVGVV TGRQSPGTAA GVTFFTLEDD
TGNINVVVWQ ATARAQKQAY LGAKVLMVKG ILEREGEVTH VIAGKLIDCT HYLNNLQSKS
RDFH
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