Gene VEA_003012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_003012 
Symbol 
ID8556742 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp1559915 
End bp1561132 
Gene Length1218 bp 
Protein Length405 aa 
Translation table11 
GC content45% 
IMG OID646406105 
ProductMlc transcriptional repressor of MalT (the transcriptional activator of maltose regulon) and manXYZ operon 
Protein accessionYP_003285639 
Protein GI262393785 
COG category[G] Carbohydrate transport and metabolism
[K] Transcription 
COG ID[COG1940] Transcriptional regulator/sugar kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACATGG CTCAACCGGG CCATATTGAT CATATCAAAC AGGTCAATGC TGGTCGTGTA 
TATAAACTAA TTGACCTAAA AGGTCCTATT TCTCGAATTG ATTTGTCCAA GCAGAGTGAG
CTTGCTCCTG CCAGTATCAC CAAAATCACT CGAGAATTAA TTGAAGCGCA CTTGATTCAT
GAAACCACAG TACAAGAAGC GACGAGTCGT GGTCGACCTG CCGTCGGTTT GCAGGTCAAC
AACGAAGGGT GGCAATTTCT GTCAATGCGT TTGGGGCGAG GTTATTTAAC TATTGCTCTG
CATGAGCTAG GTGGCGATGT GTTGATCGAT ACTAAAATCG AGATACACGA ACGTGACCAA
GACGATGTGC TTGAGCGTCT GCTCTACGAA ATTGATGAAT TCTTCCAAAC TTACGCGGAT
CAACTTGACC GTGTTACCAG TATTGCAATT ACGCTGCCTG GCCTTGTGAA TTCAGAGCAA
GGTGTCGTGC TGCAAATGCC TCATTACAAT GTCGAAAATC TTGCTCTTGG ACCAGAGATA
TACAAAGCAA CGGGCTTGCC AGTGTTCATT GCCAATGACA CGCGAGCTTG GGCATTAGCA
GAAAAGCTTT TCGGCCATTC TCAAGATAAT GACAACTCCG TTCTTATCTC TATTCACCAT
GGTTTAGGTG CCGGCATCAT TCTGGATGGG CGCGTTTTGC AAGGTCGTCA CGGCAACATT
GGTGAGCTTG GGCATATTCA AATCGATCCA AATGGAAAAC GTTGTCATTG TGGCAACATT
GGTTGTTTGG AAACCGTTGC CAGTTCTCAA GCCATTCGTG AAGAAGTCGT AAGACGAATT
GCTGATGGCG AAGACTCTAT TCTTGCTGAA CAAGAAGAAA TGAGTATTGA GAGCATTTGT
GAAGCGGCAG CGAACGGTGA TACGTTGGCA GTTGATGTGA TTGAAAAGCT TGGACGCTAC
TTAGGTTCCG CAATTGCTAT TGTGATCAAC TTATTTAACC CTGAGAAGAT CTTGATCGGT
GGTGTGATTA ACCAAGCAAA AGATGTACTT TATCCTGCGG TGCGTCGCTG TATCGAAGAG
CAGAGTTTAC CGGTTTATCA CCAAGATCTT GAGCTGGTGG AATCTCGTTT CTATAAGCAA
GCAACAATGC CTGGTGCCGC GTTGATCAAG CAAGCGTTGT ACGATGGTCA GTTATTGATG
AAGGTTGTGG AAGGCTAA
 
Protein sequence
MYMAQPGHID HIKQVNAGRV YKLIDLKGPI SRIDLSKQSE LAPASITKIT RELIEAHLIH 
ETTVQEATSR GRPAVGLQVN NEGWQFLSMR LGRGYLTIAL HELGGDVLID TKIEIHERDQ
DDVLERLLYE IDEFFQTYAD QLDRVTSIAI TLPGLVNSEQ GVVLQMPHYN VENLALGPEI
YKATGLPVFI ANDTRAWALA EKLFGHSQDN DNSVLISIHH GLGAGIILDG RVLQGRHGNI
GELGHIQIDP NGKRCHCGNI GCLETVASSQ AIREEVVRRI ADGEDSILAE QEEMSIESIC
EAAANGDTLA VDVIEKLGRY LGSAIAIVIN LFNPEKILIG GVINQAKDVL YPAVRRCIEE
QSLPVYHQDL ELVESRFYKQ ATMPGAALIK QALYDGQLLM KVVEG