Gene VEA_003001 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_003001 
Symbol 
ID8556731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand+ 
Start bp1548874 
End bp1549503 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content49% 
IMG OID646406094 
Productthymidylate kinase 
Protein accessionYP_003285628 
Protein GI262393774 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0125] Thymidylate kinase 
TIGRFAM ID[TIGR00041] thymidylate kinase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.390558 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCAA ACTTTATTGT CGTTGAAGGC CTAGAAGGCG CGGGTAAAAG CACTGCGATT 
AAAACCGTTT TAGATACGCT AAAAGCGGCA GGTATTGAAA ATATCGTAAA TACTCGTGAG 
CCAGGAGGCA CGCCGCTAGC AGAAAAGATG CGCGCTCTGG TGAAAGAAGA GCATGAAGGC 
GAAGAACTTA AAGACATGAC GGAGTTGCTT CTTCTATATG CTGCACGTGT CCAGTTGGTT 
GAGAACGTGA TCAAACCAGC TTTGGCGAAC GGTCAGTGGG TGGTGGGTGA CCGCCACGAT 
ATGTCGTCGC AGGCTTATCA AGGTGGTGGC CGTCAGATTG ACGCGTCGCT AATGAAAAAC 
CTTCGAGACA CAACGCTTGG TGATTTTAAA CCTGCTTTCA CTCTCTATAT GGATATCGAC 
CCTCGCGTTG GGCTTGAGCG TGCGCGTGGG CGTGGTGAGC TCGATCGTAT CGAGAAGATG 
GATATCAGCT TCTTTGAACG TACACGAGAG CGTTATTTGG AGATTGCTCA TGCTGATCCT 
TCTGTCATTA TCATTAACGC TGAGCAGGCG ATCGAAGGCG TGTCGCGTGA TATTCGGGAC 
GCTCTTAACG AGTGGTTAGC TCGTCAATAA
 
Protein sequence
MKANFIVVEG LEGAGKSTAI KTVLDTLKAA GIENIVNTRE PGGTPLAEKM RALVKEEHEG 
EELKDMTELL LLYAARVQLV ENVIKPALAN GQWVVGDRHD MSSQAYQGGG RQIDASLMKN 
LRDTTLGDFK PAFTLYMDID PRVGLERARG RGELDRIEKM DISFFERTRE RYLEIAHADP 
SVIIINAEQA IEGVSRDIRD ALNEWLARQ