Gene VEA_002978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_002978 
Symbol 
ID8556708 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp1521329 
End bp1522915 
Gene Length1587 bp 
Protein Length528 aa 
Translation table11 
GC content45% 
IMG OID646406071 
ProductNa+/H+ antiporter 
Protein accessionYP_003285605 
Protein GI262393751 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3067] Na+/H+ antiporter 
TIGRFAM ID[TIGR00774] Na+/H+ antiporter NhaB 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGATAT CGCTCGGAAA CGCTTTTATC AAGAACTTTC TTGGTAAAGC GCCTGATTGG 
TACAAAGTTG CCATTATAGC CTTCTTAATA ATTAACCCGA TTGTATTCTT CCTAATAAAC
CCATTTGTTG CTGGGTGGTT GCTGGTTGCT GAATTTATTT TCACGCTTGC AATGGCATTA
AAATGCTACC CATTACAACC TGGTGGTTTA CTTGCTATTG AAGCCATCGC TATCGGCATG
ACTAGCCCTG CGCAAGTTAA GCACGAGTTG GTGGCAAATA TTGAAGTATT ACTGCTTCTG
GTATTTATGG TTGCGGGCAT CTACTTCATG AAGCATTTAT TGCTGTTCAT TTTTACCAAA
ATTTTACTTG GTATTCGCTC CAAAACCCTT CTATCACTTG CGTTTTGCTT TGCCGCTGCA
TTTTTATCTG CGTTTTTGGA TGCTTTGACG GTTATCGCCG TTGTTATCAG TGTGGCGATC
GGTTTCTACT CTATCTACCA CAAAGTGGCG TCAGGTAATC CGATTGGTGA CCATGACCAC
ACACAAGATG ACACGATCAC TGAGCTAACG CGTGATGACT TAGAAAACTA CCGCGCCTTT
TTACGCTCAT TGTTGATGCA CGCTGGTGTA GGTACTGCGT TAGGTGGCGT AACCACTATG
GTAGGTGAAC CTCAAAACTT AATTATTGCA GACCAAGCGG GTTGGTTATT TGGTGAATTC
CTAATCCGTA TGTCTCCAGT GACGCTACCC GTATTTTTCT GCGGTCTCAT CACTTGTGCT
CTAGTCGAAA AGCTTAAAGT GTTTGGCTAC GGTGCAAAAC TTCCTAACAA CGTTCGTCAA
ATCCTCGTTG ACTTTGACAA TGAAGAGCGC AAAACGCGTA CCAATCAAGA CGTTGCAAAG
CTATGGGTTC AAGGACTTAT TGCTGTTTGG TTGATCGTAG CATTAGCCTT ACACTTGGCG
GCGGTAGGCT TAATTGGTCT TTCAGTGATC ATCTTAGCGA CGGCTTTCAC TGGCGTTATT
GAAGAGCATT CCATGGGTAA AGCGTTTGAA GAGGCTCTGC CTTTCACTGC ACTACTTGCG
GTATTTTTCT CGATCGTTGC GGTAATCATC GACCAAGAGT TGTTTAAACC AGTTATCGAC
GCGGTGCTTG CCGTTGAAGA TAAAGGCACT CAGTTAGCTC TGTTCTATGT CGCGAATGGC
TTACTATCAA TGGTGTCGGA TAACGTATTC GTCGGTACGG TTTACATCAA TGAAGTAAAA
ACAGCACTCA TTGAAGGTCT CATTACTCGC GAGCAGTTCG ACTTACTGGC AGTTGCTATC
AACACTGGTA CTAACCTACC ATCTGTTGCT ACGCCAAACG GTCAAGCGGC ATTCCTATTC
CTACTCACCT CGGCTCTCGC TCCATTAATT CGTCTGTCTT ACGGTCGAAT GGTTATCATG
GCGCTGCCTT ACACCATCGT TCTTGCGATT GTCGGGCTAA TGGGCATTAT GTTCTTCCTA
GAGCCTGCAA CGGCTTCTTT CTACGATGCA GGCTGGATTT TACCTCATAG TGGTGATCTG
ACTCCCGTAG TCTCTGGCGG TCACTAA
 
Protein sequence
MPISLGNAFI KNFLGKAPDW YKVAIIAFLI INPIVFFLIN PFVAGWLLVA EFIFTLAMAL 
KCYPLQPGGL LAIEAIAIGM TSPAQVKHEL VANIEVLLLL VFMVAGIYFM KHLLLFIFTK
ILLGIRSKTL LSLAFCFAAA FLSAFLDALT VIAVVISVAI GFYSIYHKVA SGNPIGDHDH
TQDDTITELT RDDLENYRAF LRSLLMHAGV GTALGGVTTM VGEPQNLIIA DQAGWLFGEF
LIRMSPVTLP VFFCGLITCA LVEKLKVFGY GAKLPNNVRQ ILVDFDNEER KTRTNQDVAK
LWVQGLIAVW LIVALALHLA AVGLIGLSVI ILATAFTGVI EEHSMGKAFE EALPFTALLA
VFFSIVAVII DQELFKPVID AVLAVEDKGT QLALFYVANG LLSMVSDNVF VGTVYINEVK
TALIEGLITR EQFDLLAVAI NTGTNLPSVA TPNGQAAFLF LLTSALAPLI RLSYGRMVIM
ALPYTIVLAI VGLMGIMFFL EPATASFYDA GWILPHSGDL TPVVSGGH