| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002975 |
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| Symbol | |
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| ID | 8556705 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 1518870 |
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| End bp | 1519829 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646406068 |
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| Product | tRNA-dihydrouridine synthase C |
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| Protein accession | YP_003285602 |
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| Protein GI | 262393748 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.386043 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGAGTTG TACTAGGCCC AATGGAAGGC GTTTTAGACC ATTTGATGCG CCAAATCCTG
ACCGAGATAA ACGACTATGA CCTATGTGTT ACGGAATTTG TTCGAGTCAT CGACCAGTTA
TTGCCCGATC ATGTATTTCA CCGTTTATGC CCGGAGCTGT TGCAAGGTTC TCAAACCGCA
TCAGGTGTGC CAGTACATGT GCAATTGTTA GGACAAGAAC CAAACTGGAT GGCTGAGAAC
GCAATTAAAG CGGCGAGCCT AGGCGCCAGA GGCATCGACA TAAATTTTGG TTGCCCAGCC
AAAATGGTCA ATAAAAGTAA GGGTGGTGCT GCTCTACTTC AGCATCCTGA GCTAATTCAC
CGTGTGGTTA AAGCTTGTCG AGAAGCTGTT CCAGAGGCTA TTCCTGTGAC CGCAAAAATT
CGTCTTGGCT GGGAAAACCC TGAAGATTGC TTTGAAATTG TTGATGCCAT TCAATCTGCT
GGTGCAAATG AACTCACCGT TCACGCTCGG ACTAAGCAGG GTGGTTACAA AGCGTCTGAG
ATAAAATGGG ATTACATCAA CCAAATTCGC GAACGTTTTG ATATTCCGCT TATTGCGAAT
GGCGAAATTT GGAATTATGA AGATGGTCAA CGTTGCATTG AAACGACTGG CGTTGACTCT
TTGATGGTGT GCCGCGGCGC TTTCAATATC CCTAACTTGG GCAACATGGT AAAACACAAC
CACCAGCCAA TGTCATGGCC CGAGGTGGTT GAGCTACTGA TCTACTACTC CAAGTTTGAG
ATGAAAGGCG ACAAAGGCTT GTACTATCCA AACCGCGTAA AACAATGGTT CTCTTACTTA
CGTCAGGCCT ATCCTGAAGC AAAAGATCTA TTCAGAGAAA TCCGAACGTT TAACAAAGCC
GCGCCGATTG TTGAGCATAT TCAACGTTAT CGTGATGAGT TAAATTCTCA GGTTGCATAA
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| Protein sequence | MRVVLGPMEG VLDHLMRQIL TEINDYDLCV TEFVRVIDQL LPDHVFHRLC PELLQGSQTA
SGVPVHVQLL GQEPNWMAEN AIKAASLGAR GIDINFGCPA KMVNKSKGGA ALLQHPELIH
RVVKACREAV PEAIPVTAKI RLGWENPEDC FEIVDAIQSA GANELTVHAR TKQGGYKASE
IKWDYINQIR ERFDIPLIAN GEIWNYEDGQ RCIETTGVDS LMVCRGAFNI PNLGNMVKHN
HQPMSWPEVV ELLIYYSKFE MKGDKGLYYP NRVKQWFSYL RQAYPEAKDL FREIRTFNKA
APIVEHIQRY RDELNSQVA
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