Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_002971 |
Symbol | |
ID | 8556701 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | + |
Start bp | 1513488 |
End bp | 1514423 |
Gene Length | 936 bp |
Protein Length | 311 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 646406064 |
Product | ABC-type uncharacterized transport system permease component |
Protein accession | YP_003285598 |
Protein GI | 262393744 |
COG category | [R] General function prediction only |
COG ID | [COG4120] ABC-type uncharacterized transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTGCAT TTGCTTTTTT TGGCGCACTC GAAATTGGCT TAATTTATGG CCTAGTTGCC TTGGGTGTGT ATCTTACGTT TCGTGTTCTC GATTTCCCCG ATTTGAGTGT GGATGGCAGC TTTCCAATGG GAGCTGCGGT GGCTGCAACG GCGATTGTCG CAGGTATTAA TCCTTGGCTT GCGACAATAA TGGCGATGAT AGCCGGTAGT ATGACGGGGT GGGTAACCGC TTTTTTGGCT GTTCGATGTG GTATATTGCA CCTGTTAGCT TCCATTCTTA CCATGATCGC GGCATTTTCA ATCAATATTC GTATTATGGG CAAACCTAAT ATGGCGTTGC TTGGAGAGGA TACGATTCTC ACTCCGTTTG AAGCATTGGG CGATGCGATG TTTATTCGCC CTCTGGTTGT TGGGGTCTTA GTTCTTCTGT CCGCTTTCTT TGTCATTCGC CTGCTGAACA GCGACTTTGG TCTTGGTTTA CGGGCCACGG GCGTTAATGC GCGTATGGTT TCTGCGCAAG GGGCGAGCAC TGGTTTTTAT ACCTACTTTG GGTTGGCTTT ATCTAACGGT TTTGTCGGAT TCGCAGGCGC GTTGTTTGCA CAAACGAACA GCTTTGCAGA TGTGACCTCT GGCGTGGGCA CCATTGTGGT TGGTTTGGCT GCTGTGATTT TGGGCCAGAC CCTCATTCCG GGGCGAAAAA TTTGGGTTGC GGTATTTGCT GTCATCATCG GTTCGGTGCT TTATCGTCTT GCTGTAGCTT TCGCTTTGAG CTCTGGCATG TTTGGTTTGC AAGCGTCAGA CCTCAACCTT GTCACCGCAG TATTGGTGGC TGTCGCGCTT ATTGCTCCAA AATTAAAACA GAGCATGAGA GCGAAACAAC GCGTTACCGA TGCTAAACAA GCGGCATCAA AAAATGGTTC GGGGGAGGCG TTATGA
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Protein sequence | MSAFAFFGAL EIGLIYGLVA LGVYLTFRVL DFPDLSVDGS FPMGAAVAAT AIVAGINPWL ATIMAMIAGS MTGWVTAFLA VRCGILHLLA SILTMIAAFS INIRIMGKPN MALLGEDTIL TPFEALGDAM FIRPLVVGVL VLLSAFFVIR LLNSDFGLGL RATGVNARMV SAQGASTGFY TYFGLALSNG FVGFAGALFA QTNSFADVTS GVGTIVVGLA AVILGQTLIP GRKIWVAVFA VIIGSVLYRL AVAFALSSGM FGLQASDLNL VTAVLVAVAL IAPKLKQSMR AKQRVTDAKQ AASKNGSGEA L
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