Gene VEA_002971 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_002971 
Symbol 
ID8556701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp1513488 
End bp1514423 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content49% 
IMG OID646406064 
ProductABC-type uncharacterized transport system permease component 
Protein accessionYP_003285598 
Protein GI262393744 
COG category[R] General function prediction only 
COG ID[COG4120] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGCAT TTGCTTTTTT TGGCGCACTC GAAATTGGCT TAATTTATGG CCTAGTTGCC 
TTGGGTGTGT ATCTTACGTT TCGTGTTCTC GATTTCCCCG ATTTGAGTGT GGATGGCAGC
TTTCCAATGG GAGCTGCGGT GGCTGCAACG GCGATTGTCG CAGGTATTAA TCCTTGGCTT
GCGACAATAA TGGCGATGAT AGCCGGTAGT ATGACGGGGT GGGTAACCGC TTTTTTGGCT
GTTCGATGTG GTATATTGCA CCTGTTAGCT TCCATTCTTA CCATGATCGC GGCATTTTCA
ATCAATATTC GTATTATGGG CAAACCTAAT ATGGCGTTGC TTGGAGAGGA TACGATTCTC
ACTCCGTTTG AAGCATTGGG CGATGCGATG TTTATTCGCC CTCTGGTTGT TGGGGTCTTA
GTTCTTCTGT CCGCTTTCTT TGTCATTCGC CTGCTGAACA GCGACTTTGG TCTTGGTTTA
CGGGCCACGG GCGTTAATGC GCGTATGGTT TCTGCGCAAG GGGCGAGCAC TGGTTTTTAT
ACCTACTTTG GGTTGGCTTT ATCTAACGGT TTTGTCGGAT TCGCAGGCGC GTTGTTTGCA
CAAACGAACA GCTTTGCAGA TGTGACCTCT GGCGTGGGCA CCATTGTGGT TGGTTTGGCT
GCTGTGATTT TGGGCCAGAC CCTCATTCCG GGGCGAAAAA TTTGGGTTGC GGTATTTGCT
GTCATCATCG GTTCGGTGCT TTATCGTCTT GCTGTAGCTT TCGCTTTGAG CTCTGGCATG
TTTGGTTTGC AAGCGTCAGA CCTCAACCTT GTCACCGCAG TATTGGTGGC TGTCGCGCTT
ATTGCTCCAA AATTAAAACA GAGCATGAGA GCGAAACAAC GCGTTACCGA TGCTAAACAA
GCGGCATCAA AAAATGGTTC GGGGGAGGCG TTATGA
 
Protein sequence
MSAFAFFGAL EIGLIYGLVA LGVYLTFRVL DFPDLSVDGS FPMGAAVAAT AIVAGINPWL 
ATIMAMIAGS MTGWVTAFLA VRCGILHLLA SILTMIAAFS INIRIMGKPN MALLGEDTIL
TPFEALGDAM FIRPLVVGVL VLLSAFFVIR LLNSDFGLGL RATGVNARMV SAQGASTGFY
TYFGLALSNG FVGFAGALFA QTNSFADVTS GVGTIVVGLA AVILGQTLIP GRKIWVAVFA
VIIGSVLYRL AVAFALSSGM FGLQASDLNL VTAVLVAVAL IAPKLKQSMR AKQRVTDAKQ
AASKNGSGEA L