| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002947 |
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| Symbol | |
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| ID | 8556676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 1485140 |
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| End bp | 1487890 |
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| Gene Length | 2751 bp |
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| Protein Length | 916 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 646406039 |
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| Product | electron transport complex protein RnfC |
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| Protein accession | YP_003285574 |
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| Protein GI | 262393720 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4656] Predicted NADH:ubiquinone oxidoreductase, subunit RnfC |
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| TIGRFAM ID | [TIGR01945] electron transport complex, RnfABCDGE type, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.703595 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGTCTT TGATTGAACA AATTCGTACA GGCTCGCTTT GGGATTTCCC TGGTGGTGTG
CATCCGGCAG AAAACAAAAA GCAGTCCAAC AAAACTGAGC TCGTTCACGC GGCTATCCCA
TCAGAAATTG TATTACCGCT AAAACAGCAC ATTGGTAAGG CTGGTAACTT ATTGGTTGCC
GAAGGTGACC ACGTATTAAA AGGCCAGCCA TTAACGCAAT CCGAAACTGG TTTTACCGTT
CCAGTGCATG CTCCTACATC GGGTACGATC ACCGCCATTG AGCCTAGAAC CGTTGCTCAC
CCTTCAGGTC TGAGTGAACT CTGTGCGGTC ATTACCCCTG ATGGTAACGA TACATGGTGT
GACAGAAAAC CCGTCGCGGA TTACAAACAA GAAACACCTG ACGCACTGAT CGATATTATT
CGTCTCGCAG GCATTTCAGG TATGGGTGGC GCAGGTTTCC CTACCGCAAA AAAAATCCAA
TCAGGTTTTG CTCGCACAGA GATTCTTATC GTCAACGCAG CTGAGTGTGA GCCATACATC
ACATCAGATG ACAAGCTCAT GCAAGAGCAT GCCGAAGAGC TCATCCAAGG TATCGAGATT
GTCGAACATA TCCTGACACC AAAGCTCACG ATTATTGGTA TTGAAGATAA CAAACCAGAG
GCAATTAAAG CGTTAGAAGC TGCGGCTCTA AACAAAGATA TCGTCATTCG CGTTATCCCG
ACTAAATACC CTTCTGGTGG TGAAAAACAG CTGATCAAAA TTTTGACCAA TAAAGAAGTA
CCAAGCGGCG CAATTCCAGC CGATATTGGT ATTTTGGTTC AAAATGTCGG TTCTCTTTAC
TCAATCAAAC GCGCAATCAT CGATGGTGAA CCGATGATAA AACGCGTGGT GACTCTCACC
GGTAAAACAT TCAAACAACC ACGCAATGTT TGGGCATTAT TAGGTACACC AGTACAGGCG
TTATTGGATG AGTTTGGCTA TAAAGCCGAT AAGAAGTTAC AACGTTTAAT CATGGGTGGA
CCAATGATGG GCTTCACCCT TCCCCACTCT CAAGTGCCGA TTACCAAGAC AGCAAACTGT
ATCCTTGCCC CGACTCGTCG TGAGATCTCT CCACACCAAC ATGAGATGGA ATGTATTCGC
TGTAGCCAAT GTGCTGAAGC TTGCCCTGCT TCACTGCTAC CTCAGCAACT GCAATGGCAT
GCAAAAGCTG AAGAGTATGA CAAACTCGAA GAACTAAACT TAAAGGATTG TATCGAGTGC
GGTGCTTGTG CGTTTGTGTG TCCAAGTGAA ATTCCTCTCG TACAGTACTA CCGCCAAGCA
AAAGCGGAAA TTCGCACCAG AACACAAGAA GCGGAAGCTG CTGAGCGAGC GAAGCTGCGT
TTTGAAGAGA AGAAAGCGCG CATGGAGCGC GAAAAAGCAG AACGTGAAAG TCGCTTTAAG
AAAGCAGCCG ATCAGCGCCG TAAAGACATG AAATCTTCTG GTGGTGATGA TGCGATTGCA
GCAGCGATCG CACGAGTGAA AGCTCAGAAG ACAGAAACAA CAGAAAAAGC AGAGCCAGCC
GTGAAACCTG CCGTCGCAGC AGCCATTGCC AAAGCGAAGG CAAAACAGGC CGCAGCCGCT
AAAGCAGGCT CTAGTGAACC TGATAACTCA GAAATGGCAA AACTGCGCGA AGAACGCAAA
CGTCTAGCCC GCGAACGTAA AGCACAAAAA GAGCAAGGCG AAACACCAGA CAACAACGCT
GATGATAAGA AATCGGCAGT TGCAGCAGCC ATCGCCCGAG CTAAAGCGAA AAAAGCTCAA
CAAGAAGAAC CAACCGAAAC GTTAGAAGCT CAAGCACCTG CTGAGCAAAC CGACGATCCG
AAGAAAGCCG CGGTTGCTGC TGCCATTGCA CGTGCCAAAG CACGTAAAGC GAAACAAGCA
GACTCAACTG AAACTGAAGA AGCTGAAACG CCTACTGAGA AAACCGAAGA TCCGAAGAAA
GCCGCGGTTG CTGCTGCCAT TGCACGTGCC AAAGCACGTA AAGCGAAACA AGCAGACTCA
ACTGAAACTG AAGAAGCTGA AACGCCTACT GAGAAAACCG AAGATCCGAA GAAAGCCGCG
GTTGCTGCTG CTATTGCTCG CGCTAAGGCT CGTAAAGCGA AACAAGCAGA CTCAGCTGAA
ACGGTAGAAG CAGAAGCGCC TACTGAGCCA ACCGACGATC CGAAAAAAGC CGCGGTTGCT
GCTGCCATTG CGCGTGCCAA AGCGCGTAAA GCGAAACAAG CAGACTCAAC TGAAACGGAA
GAAACTGAAG CGCCTGCTGA GAAAGCTGAA GATCCGAAGA AAGCCGCGGT TGCTGCTGCC
ATTGCACGCG CCAAAGCGCG TAAAGCTAGG CAAGAAGAAC CAGCCGAAAC GGTAGAAGCT
GAAACGCCTG CTGAACAAGC TGAAGATCCG AAAAAAGCGG CTGTCGCTGC GGCTATTGCG
CGTGCCAAAG CGCGTAAAGC TAAGCAAGAA GAACCAGCCG AAACGGTAGA AGCTGAAACG
CCTGCTGAAC AAACTGAAGA TCCGAAAAAA GCGGCTGTCG CTGCGGCCAT TGCGCGTGCC
AAAGCGCGTA AAGCTAAGCA AGAAGAACCA GCCGAAACGG TAGAAGCTGA AACGCCTGCT
GAACAAACTG AAGATCCGAA AAAAGCGGCT GTCGCTGCTG CTATTGCGCG CGCGAAGGCT
CGCAAAGCGC AGCAAGAAGC TAATAAAAAT AATACTGAGG AGAACGAGTA G
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| Protein sequence | MLSLIEQIRT GSLWDFPGGV HPAENKKQSN KTELVHAAIP SEIVLPLKQH IGKAGNLLVA
EGDHVLKGQP LTQSETGFTV PVHAPTSGTI TAIEPRTVAH PSGLSELCAV ITPDGNDTWC
DRKPVADYKQ ETPDALIDII RLAGISGMGG AGFPTAKKIQ SGFARTEILI VNAAECEPYI
TSDDKLMQEH AEELIQGIEI VEHILTPKLT IIGIEDNKPE AIKALEAAAL NKDIVIRVIP
TKYPSGGEKQ LIKILTNKEV PSGAIPADIG ILVQNVGSLY SIKRAIIDGE PMIKRVVTLT
GKTFKQPRNV WALLGTPVQA LLDEFGYKAD KKLQRLIMGG PMMGFTLPHS QVPITKTANC
ILAPTRREIS PHQHEMECIR CSQCAEACPA SLLPQQLQWH AKAEEYDKLE ELNLKDCIEC
GACAFVCPSE IPLVQYYRQA KAEIRTRTQE AEAAERAKLR FEEKKARMER EKAERESRFK
KAADQRRKDM KSSGGDDAIA AAIARVKAQK TETTEKAEPA VKPAVAAAIA KAKAKQAAAA
KAGSSEPDNS EMAKLREERK RLARERKAQK EQGETPDNNA DDKKSAVAAA IARAKAKKAQ
QEEPTETLEA QAPAEQTDDP KKAAVAAAIA RAKARKAKQA DSTETEEAET PTEKTEDPKK
AAVAAAIARA KARKAKQADS TETEEAETPT EKTEDPKKAA VAAAIARAKA RKAKQADSAE
TVEAEAPTEP TDDPKKAAVA AAIARAKARK AKQADSTETE ETEAPAEKAE DPKKAAVAAA
IARAKARKAR QEEPAETVEA ETPAEQAEDP KKAAVAAAIA RAKARKAKQE EPAETVEAET
PAEQTEDPKK AAVAAAIARA KARKAKQEEP AETVEAETPA EQTEDPKKAA VAAAIARAKA
RKAQQEANKN NTEENE
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