Gene VEA_002943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_002943 
Symbol 
ID8556672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand- 
Start bp1482056 
End bp1482697 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content43% 
IMG OID646406035 
Productendonuclease III 
Protein accessionYP_003285570 
Protein GI262393716 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR01083] endonuclease III 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.00243051 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAAAA TAAAAAGAAT CGAAATTCTT GAGCGATTAC GAGAAAACAA TCCGAATCCT 
CAAACTGAGC TTAACTGGAG CTCCCCTTTT GAGCTGCTAA TCGCGGTATT ACTATCAGCG 
CAAGCAACCG ATGTAAGTGT CAATAAAGCC ACCGACAAGC TTTTCCCTGT CGCTAATACA 
CCGAAAAGTA TTCTCGATTT GGGAGTTGAT GGCTTAAAAG AATACATAAA GACCATCGGT 
TTATTTAACT CAAAAGCAGA AAACACTATC AAGACTTGTA AGATCTTGTT GGAAAAACAC 
AATGGTGAAG TTCCTGAAGA TCGTGCAGCG TTAGAAGCGC TACCAGGCGT AGGTCGCAAG 
ACCGCAAACG TCGTGCTCAA CACCGCTTTT GGTTGGCCAA CCATTGCCGT CGATACGCAC 
ATTTATCGCG TGTCGAATCG TACTAAGTTT GCAATGGGCA AAACGGTTGA TGATGTCGAG 
CAAAAGCTAT TAAAAGTTGT GCCAAAAGAG TTCAAACTCG ATGTGCACCA CTGGCTCATT 
CTTCATGGCC GCTACACGTG CTTGGCGAGA AAGCCTCGCT GCGGTAGCTG CATTATTGAA 
GATTTGTGCG AATATAAAGA GAAAGTATAT CCAGATAGCT AA
 
Protein sequence
MNKIKRIEIL ERLRENNPNP QTELNWSSPF ELLIAVLLSA QATDVSVNKA TDKLFPVANT 
PKSILDLGVD GLKEYIKTIG LFNSKAENTI KTCKILLEKH NGEVPEDRAA LEALPGVGRK 
TANVVLNTAF GWPTIAVDTH IYRVSNRTKF AMGKTVDDVE QKLLKVVPKE FKLDVHHWLI 
LHGRYTCLAR KPRCGSCIIE DLCEYKEKVY PDS