| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002931 |
|---|
| Symbol | |
|---|
| ID | 8556660 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | + |
|---|
| Start bp | 1471394 |
|---|
| End bp | 1474096 |
|---|
| Gene Length | 2703 bp |
|---|
| Protein Length | 900 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 646406023 |
|---|
| Product | acetaldehyde dehydrogenase |
|---|
| Protein accession | YP_003285558 |
|---|
| Protein GI | 262393704 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1454] Alcohol dehydrogenase, class IV |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00244421 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTGTAA CTAATATGGC TGAACTAGAT GCAATGATTG CTCGCGTTAA GAAAGCGCAA
GAAGAGTTCG CTACTTACTC TCAAGAGCAA GTAGACAAAA TCTTCCGTGC AGCATCGCTT
GCAGCTAACC AAGCCCGTAT CCCGCTAGCT CAACAAGCGG TTGAAGAATC TGGTATGGGT
ATTGTTGAAG ATAAAGTAAT CAAGAACCAC TTCGCTTCTG AGTTTATCTA CAACAAATAC
AAAGACGAAC AAACGTGTGG CATCCTAGAA GAGGATGACA ACCTAGGTAC TATGACTATC
GCTGAACCTG TAGGTATCAT CTGCGGTATC GTACCAACGA CTAACCCTAC ATCTACAGCG
ATCTTCAAAT CTCTAATCTC TCTGAAGACT CGTAACGGTA TCATCTTCTC ACCACACCCA
CGTGCGAAAA ACTCGACTAA CGACGCAGCG AAACTGGTTC TAGACGCAGC AGTAGCAGCG
GGTGCACCAA AAGACATCAT CGGTTGGATC GACCAACCTT CTGTTGAGCT TTCTAACGCT
CTTATGAAAC ACGATGACAT CGCGCTTATC CTTGCAACTG GTGGCCCAGG CATGGTTAAA
GCAGCTTACT CTTCTGGTAA ACCAGCAATC GGTGTAGGTG CAGGTAACGT TCCTGTTGTT
ATCGACGAAA CTGCTGACAT CAAACGTGCA GTGGCTTCTA TCCTGATGTC TAAGACTTTC
GACAACGGCG TAGTATGTGC TTCTGAGCAG GCTGCAATCG TCGTTGATGA AGTGTACGAC
GAAGTAAAAG AGCGTTTTGC TTCTCACAAA GCTTACGTAC TAAGCAAAGC AGAAGCAGAA
AAAGTTCGTA AAGTTCTTCT TATCGATGGC GCGCTAAACG CGAAAATCGT AGGTCAGCCA
GCAGCGGCAA TCGCTGAAAT GGCAGGCGTT AAAGTTCCAG CAGACACGAA AGTCCTTGTT
GGTGAAGGTC TAGGTAAAGT GTCTCACGAT GACGCATTCG CTCACGAGAA ACTATCTCCA
ACTCTAGGTC TATTCCGTGC TGACAACTTC GAAGACGCGG TTGCTCAAGC GGTAACTATG
GTTGAGATTG GTGGTATCGG CCACACATCT GGTCTTTACA CTAACCAAGA TACTAACGCT
GACCGTATCC GTTACTTCGG TGACAAGATG AAGACAGCTC GTATCCTAAT CAACATCCCG
ACTACTCACG GTGGTATCGG TGACTTGTAC AACTTCAACG TTGCGCCTTC TCTAACTCTA
GGTTGTGGTT CATGGGGTGG TAACTCTATC TCTGAGAACG TAGGTCCTAA ACACCTAATC
AACAAGAAAA CTGTAGCGAA GCGAGCTGAA AACATGTTGT GGCATAAACT ACCTAAGTCA
ATCTACTTCC GTCGTGGTAG CCTTCCAATT GCTCTAGGCG ACCTAGAAGG TAAGAAGCGC
GCATTCTTAG TAACTGACCG TTTCCTATTC AACAATGGTT ACGCAGATGA CGTAGTAAGC
CTACTTAAAG CTCAAGGCAT GGAAGTTCAA ACATTCTTCG ATGTTGAAGC TGACCCAACG
CTTTCTGTAG TAGAGAAAGG TGCGGCTCAA ATGGCTAGCT ACCAACCAGA CGTTATCCTA
GCGCTAGGTG GTGGTTCACC AATGGATGCT GCGAAGATCA TGTGGGTAAT GTACGAGCAC
CCAGAAACTC ACTTCGAAGA ACTAGCAATG CGCTTTATGG ACATCCGTAA ACGTATTTAC
AAGTTCCCTA AAATGGGTCA AAAAGCTGAG CTTGTATGTA TCACCACAAC TTCAGGTACT
GGTTCAGAAG TTACACCATT TGCGGTTGTT ACTGACGACA AGACTGGTGC TAAATACCCA
CTAGCTGACT ACGAAATCAC GCCAAACATG GCTATCGTTG ATGCTAACCT AGTGATGAAC
ATGCCTAAGT CTCTAACAGC ATTTGGTGGT TACGATGCAG TAACTCACGC TCTAGAAGCT
TACGTATCTG TTCTTGCGAA CGAATACTCA GATGGTCAGG CTCTACAAGC ACTTAAGATG
CTAAAAGAAT ACTTACCTTC AAGCTACGCG AACGGCGCTA ACGACCCAAT CGCTCGTGAG
AAAGTACACA ACGCCGCAAC TATCGCTGGT GTGGCATTTG CTAACGCATT CCTAGGTGTT
TGTCACTCAA TGGCGCACAA ACTAGGTGCT GAGTTCCACA TTCCACATGG CCTAGCAAAC
GCACTACTTA TCTCTAACGT TGTACGTTAC AACGCGAACG ATAACCCAAC TAAACAAACA
GCGTTCTCTC AATACGACCG CCCACAAGCA CGTCGTCGTT ACGCTGAAGT TGCTGACCAC
TTAGGTCTAA GCCAAGCTGG TGACCGTACT GCTCAGAAAA TTGAACGTCT ACTAGCATGG
TTGGATGAGC TAAAAGTGAA CCTAGACATC CCAATGTCTA TCCAAGCGGC AGGCGTAGCT
GAAGCAGACT TTATCGCGAA ACTTGATGAG CTAGCAGTTG AAGCGTTCGA TGACCAATGT
ACTGGTGCGA ACCCTCGCTA CCCACTAATT AGCGAACTTA AAGATGTGTT AATGGCTTCT
TACTACGGTA AAGCATTCGT TGAAGGTGAA ACTTTCGAAG GTACAACAGT TATCAAGAAG
AAAGCAGACC AAGAAGCAGC GAAAGCGGCG CCTAAAGCAA AGAAAGAAAA AGCTGACGCG
TAA
|
|---|
| Protein sequence | MPVTNMAELD AMIARVKKAQ EEFATYSQEQ VDKIFRAASL AANQARIPLA QQAVEESGMG
IVEDKVIKNH FASEFIYNKY KDEQTCGILE EDDNLGTMTI AEPVGIICGI VPTTNPTSTA
IFKSLISLKT RNGIIFSPHP RAKNSTNDAA KLVLDAAVAA GAPKDIIGWI DQPSVELSNA
LMKHDDIALI LATGGPGMVK AAYSSGKPAI GVGAGNVPVV IDETADIKRA VASILMSKTF
DNGVVCASEQ AAIVVDEVYD EVKERFASHK AYVLSKAEAE KVRKVLLIDG ALNAKIVGQP
AAAIAEMAGV KVPADTKVLV GEGLGKVSHD DAFAHEKLSP TLGLFRADNF EDAVAQAVTM
VEIGGIGHTS GLYTNQDTNA DRIRYFGDKM KTARILINIP TTHGGIGDLY NFNVAPSLTL
GCGSWGGNSI SENVGPKHLI NKKTVAKRAE NMLWHKLPKS IYFRRGSLPI ALGDLEGKKR
AFLVTDRFLF NNGYADDVVS LLKAQGMEVQ TFFDVEADPT LSVVEKGAAQ MASYQPDVIL
ALGGGSPMDA AKIMWVMYEH PETHFEELAM RFMDIRKRIY KFPKMGQKAE LVCITTTSGT
GSEVTPFAVV TDDKTGAKYP LADYEITPNM AIVDANLVMN MPKSLTAFGG YDAVTHALEA
YVSVLANEYS DGQALQALKM LKEYLPSSYA NGANDPIARE KVHNAATIAG VAFANAFLGV
CHSMAHKLGA EFHIPHGLAN ALLISNVVRY NANDNPTKQT AFSQYDRPQA RRRYAEVADH
LGLSQAGDRT AQKIERLLAW LDELKVNLDI PMSIQAAGVA EADFIAKLDE LAVEAFDDQC
TGANPRYPLI SELKDVLMAS YYGKAFVEGE TFEGTTVIKK KADQEAAKAA PKAKKEKADA
|
|---|
| |