Gene VEA_002928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_002928 
Symbol 
ID8556657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand+ 
Start bp1468035 
End bp1469150 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content46% 
IMG OID646406020 
Productaspartate-semialdehyde dehydrogenase 
Protein accessionYP_003285555 
Protein GI262393701 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0136] Aspartate-semialdehyde dehydrogenase 
TIGRFAM ID[TIGR01745] aspartate-semialdehyde dehydrogenase, gamma-proteobacterial 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.00256159 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGTTG GTTTAGTTGG TTGGCGCGGT ATGGTTGGTT CAGTCCTTAT GCAGCGTATG 
GTTGAAGAGA AAGACTTCGA CCTAATCGAA CCAGTATTCT ACAGTACTTC TCAAGTTGGT 
ATTCCTGCTC CTAACTTAGG AAAAGACGCA GGCTTACTGC AAGACGCGTA TGATATTGAA 
AGCTTAAAAC AGCTTGATGC GGTAATTACA TGTCAAGGTG GTAGCTACAC AGAAAAAGTT 
TACCCAGCAC TTCGACAAGC CGGTTGGAAA GGCTACTGGA TTGACGCAGC ATCTACGTTA 
CGTATGGCGG AAGATTCCAT CATCACGCTT GATCCTGTGA ACTTAAAGCA AATCCAACAA 
GGCATCCACG GTGGCACGAA CACATTTGTT GGTGGTAACT GTACGGTTAG TTTAATGCTA 
ATGGGTCTAG GTGGCTTATT CGAAAAAGGC CTTGTTGAGT GGACAAGCGC AATGACATAC 
CAAGCCGCTT CTGGTGCTGG CGCGCAAAAC ATGCGTGAAC TGATCTCGCA AATGGGCGTT 
ATCAATGACT CTGTAAGTTC CGAACTTGCA AACCCATCAA GCTCTATCCT AGATATTGAT 
AAAAAAGTTG CAGACACAAT GCGCAGCGGT TCTTTCCCTA CCGATAAATT CGGTGTACCA 
CTAGCTGGCT CGCTTATTCC GTGGATCGAT GTGAAACGTG ATAACGGTCA GAGTAAAGAA 
GAGTGGAAAG CGGGCGCAGA GGCAAACAAA ATTTTGGGCT CACAAAGCTC GCCTGTGCCA 
ATCGATGGTA CTTGCGTCCG TATTGGTGCG ATGCGCTGTC ACTCTCAAGC ACTCACTATC 
AAGCTTAAGC AAAATGTCCC AATGGATGAA ATCGAAGAAA TCATCGCCAC TCATAACGAC 
TGGGTTAAAG TGATTCCTAA CGATCGTGAC ATTACTGCGC AAGAACTTAC ACCTGCAAAA 
GTAACAGGCA CTATGTCCGT ACCAGTAGGT CGTCTACGTA AGATGGCAAT GGGTGATGAC 
TTCCTAAATG CTTTCACTGT TGGTGACCAA CTACTATGGG GCGCAGCAGA ACCATTGCGT 
CGTACGTTAC GCATTATTCT TTCTGAGAAA GCATAA
 
Protein sequence
MRVGLVGWRG MVGSVLMQRM VEEKDFDLIE PVFYSTSQVG IPAPNLGKDA GLLQDAYDIE 
SLKQLDAVIT CQGGSYTEKV YPALRQAGWK GYWIDAASTL RMAEDSIITL DPVNLKQIQQ 
GIHGGTNTFV GGNCTVSLML MGLGGLFEKG LVEWTSAMTY QAASGAGAQN MRELISQMGV 
INDSVSSELA NPSSSILDID KKVADTMRSG SFPTDKFGVP LAGSLIPWID VKRDNGQSKE 
EWKAGAEANK ILGSQSSPVP IDGTCVRIGA MRCHSQALTI KLKQNVPMDE IEEIIATHND 
WVKVIPNDRD ITAQELTPAK VTGTMSVPVG RLRKMAMGDD FLNAFTVGDQ LLWGAAEPLR 
RTLRIILSEK A