| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002917 |
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| Symbol | |
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| ID | 8556645 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 1455552 |
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| End bp | 1457519 |
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| Gene Length | 1968 bp |
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| Protein Length | 655 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646406008 |
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| Product | DNA topoisomerase III |
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| Protein accession | YP_003285544 |
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| Protein GI | 262393690 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA |
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| TIGRFAM ID | [TIGR01056] DNA topoisomerase III, bacteria and conjugative plasmid |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCGTC TGTTTATTGC TGAAAAACCA AGCTTAGGCC GTGCGATTGC CGCTGCACTG
CCAAACCCTC AAAAGAAAGA TCAAGGATTC ATCCGCTGTG GGAACGGGGA TATCGTTACT
TGGTGTATCG GCCATTTGCT CGAACAAGTC GAACCTGACG CTTACGATGA GCGTTATAAA
AAGTGGAATA TGGCAGATTT ACCAATTGTT CCGCAGCAAT GGCAGCTCAG ACCGAGGAAA
AGCGCAAGTA AGCAATTAAC AGTGATTCGT AAATTGCTCA AAGAAGCTAA CGAAGTCATT
CATGCAGGAG ACCCAGACCG AGAGGGTCAG CTGTTAGTTG ATGAAGTTCT CGACTATTGC
AAGTTATCTA AAACCAAGAA GGAATCCACA CAGCGTTTGC TGATTTCCGA CTTGAACTTA
CCTGCGGTTA AACGCGCACT CAGTTCTATG CGCGGTAATC GCGAGTTTAT CCCACTTTCA
GTTTCTGCAT TGGCCCGCTC TCGGGCTGAT TGGTTGTATG GCATGAACAT GTCTCGTGCT
TATACCTTGC TTGGTCAAAA GGCAGGGTAT CAAGGTGTTC TCTCGGTAGG GCGAGTGCAA
ACGCCAGTTC TTGGCTTAGT GGTGCGTCGT GATGAAGAAA TCGAAAACTT TGTCCCGAAG
GACTATTTTA CCCTACATGC TCTGATTCCG TATCAAGATG CCAATGGTAC ATTTGATATT
CGTGCTCGTT GGAAGCCAAG TGAGGCATGC AAGCCTTGGC AGGATGAAGA AGGGCGAGTG
TTAAACCGTA AGTTAGTGGA AAACGTTGCA AACCGTATTG CAAATCAACC CGCGAAAGTG
ACGGAGTCGG AACAAAAGCA AACCAAGCAA TCAGCACCAT TACCTTATTC GTTATCTGCT
TTACAGATCG ATGCCGCGAA GCGCTATGGT ATGAGTGCGC AACAAGTACT AGATACTTGT
CAGGCATTGT ATGAAAAGCA CAAGCTGATC ACTTACCCGC GTTCAGATTG TCGCTATTTA
CCGATGGAAC ACTACTCACA AGCAGGGACG GTGACAACTG CTATTGCGAA TAACGCAAAA
GAGTTGCAAG GTGCCGTTCA GGGAGCAGAC TTAGCATTAA AGTCCAAAGC CTGGAACGAT
AAAAAAGTGG ATGCGCACCA TGCGATTATC CCTACACCGA AGCAAGCTAA TGTGAATGCG
CTTTCCGGCA ATGAGATGAA AGTGTATCAA TTGATTGCGC GCCAGTATCT CATGCAGTTT
TATCCGGCGG CGGTTTACGC AGAAGCGAAA TTGGTTTTCG ATATCGCTGG TGGTACGTTT
ATCGCGAAAG GTCGTCAGTT AGTTTCGCCG GGTTGGAAAG CGCTAATGGG CAAAACTGAC
AAGGAAGATG AAGGTATTGA TGCCGTTCCA CCGTTACCCG AAGGCACCGT GTTAACTTGT
CGTGAAGGGG AAATAAAAGA CCGAAAAACC GAGCCACCAA AGCACTTTAC CGAAGCATCG
CTGTTGCAAG CGATGACCGG GATCGCCCGT TACGTTGCGG ATAAAGAACT AAAAAAAATC
CTTCGTGATA CTGATGGGCT AGGTACGGAA GCGACTCGCG CTGGTATTTT GGACACGCTG
TTCAAACGCC AACTGCTCAC GCGTCAAGGT AAATCAATTC TCAGCTCTCC TGCGGGAAGA
GGTCTCATTC ATGCCTTGCC AGAAGATTCA ACGTACCCAG ATATGACGGC TCATTGGGAG
CACCAGTTAC AAGGTATGGC AGAGAGAAAT CAGGCATATC AGCCGTTTAT GCAAGCACTA
GAGCAACGCA TTGATGGCTT GATGGCACAA GTAAAAGCAG GGCCGATCCC TGATTCATTG
CGTCATCTAC CCAAGGTGGA ACGTCCTGCG TTTAAACGTA AAAAGCGTAG TTATTCAAAG
AGTGGTAGTG CGACTAAATC CCGTGCAACC AAAGGTAAGC GGGCATAG
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| Protein sequence | MSRLFIAEKP SLGRAIAAAL PNPQKKDQGF IRCGNGDIVT WCIGHLLEQV EPDAYDERYK
KWNMADLPIV PQQWQLRPRK SASKQLTVIR KLLKEANEVI HAGDPDREGQ LLVDEVLDYC
KLSKTKKEST QRLLISDLNL PAVKRALSSM RGNREFIPLS VSALARSRAD WLYGMNMSRA
YTLLGQKAGY QGVLSVGRVQ TPVLGLVVRR DEEIENFVPK DYFTLHALIP YQDANGTFDI
RARWKPSEAC KPWQDEEGRV LNRKLVENVA NRIANQPAKV TESEQKQTKQ SAPLPYSLSA
LQIDAAKRYG MSAQQVLDTC QALYEKHKLI TYPRSDCRYL PMEHYSQAGT VTTAIANNAK
ELQGAVQGAD LALKSKAWND KKVDAHHAII PTPKQANVNA LSGNEMKVYQ LIARQYLMQF
YPAAVYAEAK LVFDIAGGTF IAKGRQLVSP GWKALMGKTD KEDEGIDAVP PLPEGTVLTC
REGEIKDRKT EPPKHFTEAS LLQAMTGIAR YVADKELKKI LRDTDGLGTE ATRAGILDTL
FKRQLLTRQG KSILSSPAGR GLIHALPEDS TYPDMTAHWE HQLQGMAERN QAYQPFMQAL
EQRIDGLMAQ VKAGPIPDSL RHLPKVERPA FKRKKRSYSK SGSATKSRAT KGKRA
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