| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002912 |
|---|
| Symbol | |
|---|
| ID | 8556640 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | - |
|---|
| Start bp | 1448083 |
|---|
| End bp | 1449096 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 646406003 |
|---|
| Product | L-asparaginase |
|---|
| Protein accession | YP_003285539 |
|---|
| Protein GI | 262393685 |
|---|
| COG category | [E] Amino acid transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0252] L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D |
|---|
| TIGRFAM ID | [TIGR00519] L-asparaginases, type I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000000987582 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTAGAA AACACATCTA CATCGCTTAC ACCGGTGGCA CCATCGGAAT GCAAAAATCG
GATCACGGCT ATGTGCCTGT TGCTGGCTTT ATGGAAAAGC AACTAACAAG CATGCCAGAG
TTTCACCGTC CTGAAATGCC GGATTACACT ATCCACGAAT ACGACCCTCT GATTGACTCA
TCAGATATGA CGCCTGCCGA CTGGCAGCAG ATTGCGGATG ATATTCGTGA CAACTATGAC
AAATACGATG GTTTCGTCAT CCTACATGGT ACTGACACCA TGGCATATAC AGCATCTGCA
TTGTCTTTCA TGCTTGAAAA TCTTGGCAAG CCAGTGATTG TTACAGGTTC ACAGATCCCT
CTTGCGGAGC TGCGTTCTGA CGGTCAAGCA AACCTATTGA ATGCTCTGCA TATTGCCGCA
AACTACCCGA TCAACGAAGT TACTTTGTTC TTCAATAATC AGTTGATGCG TGGTAACCGC
AGCACAAAAT CTCATGCGGA CGGTTTTAAT GCCTTTACTT CACCAAACCT TCCTCCACTA
CTGGAAGCTG GGATCAATAT TCAAGTAAGC AACAGCGTAA CCGTTGGTGC ACAACCAGAA
GGTGAGTTTA AGGTTCACAA CATCACGCCA CAACCAATCG GTGTGATCAC CATGTATCCT
GGTATATCAC ATGAAGTTAT TCGTAATACG CTTCGTCAGC CTGTAAATGC TATGATTCTT
CTGACTTTTG GTGTCGGCAA CGCGCCTCAA AACCCTGAGC TACTGGGCCA CCTAAAAGAA
GCCTCTGAGC GCGGCGTTAT TGTCGTGAAC CTAACTCAAT GTTTGGCAGG CAAAGTGAAT
ATGGGCGGCT ACGCCACGGG TTGTGCACTG GCAGACTCTG GAGTTATCAG CGGCTTTGAC
ATGACGCCAG AAGCGGCACT AGCAAAACTG CATTACCTTC TAAGCCAAAA CCTTTCTTAC
GAAGAAGTGA AAGAGAGAAT GCAGCAAGTA CTGCGTGGTG AGATGAGCCT ATAA
|
|---|
| Protein sequence | MTRKHIYIAY TGGTIGMQKS DHGYVPVAGF MEKQLTSMPE FHRPEMPDYT IHEYDPLIDS
SDMTPADWQQ IADDIRDNYD KYDGFVILHG TDTMAYTASA LSFMLENLGK PVIVTGSQIP
LAELRSDGQA NLLNALHIAA NYPINEVTLF FNNQLMRGNR STKSHADGFN AFTSPNLPPL
LEAGINIQVS NSVTVGAQPE GEFKVHNITP QPIGVITMYP GISHEVIRNT LRQPVNAMIL
LTFGVGNAPQ NPELLGHLKE ASERGVIVVN LTQCLAGKVN MGGYATGCAL ADSGVISGFD
MTPEAALAKL HYLLSQNLSY EEVKERMQQV LRGEMSL
|
|---|
| |