Gene VEA_002887 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_002887 
Symbol 
ID8556615 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp1419018 
End bp1419536 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content48% 
IMG OID646405978 
Productrecombination protein RecR 
Protein accessionYP_003285514 
Protein GI262393660 
COG category[L] Replication, recombination and repair 
COG ID[COG0353] Recombinational DNA repair protein (RecF pathway) 
TIGRFAM ID[TIGR00615] recombination protein RecR 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.86627 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCTTTC ATTTGTTACA GCGCGATAGA AAAGGCGGTT TGCAACTTGC AGATGCGCTT 
AGCCAGGCAA TGACAGAAAT CGGTCATTGT ACTGAGTGTC GAACCTTCAC CGAAGAAGAA
GTCTGTCATA TTTGTACTAA CCCAAAACGC CAAGAAAATG GTCAAATTTG TGTGGTAGAA
AGCCCGGCAG ACATTGCTGC AGTCGAAGCA ACGGGCCAGT ATTCTGGTCG ATACTTTGTT
CTTATGGGAC ATTTGTCACC ACTAGACGGT ATTGGTCCAA GTGATATTGG ACTGGATGTG
CTTGATTACC GCTTACGTCG CGGTGATATA GCCGAAGTGA TTTTAGCAAC AAACCCGACG
GTTGAAGGAG AAGCCACTGC ACATTACATC GCAGAGCTAT GTAAAGAACA CCAAGTTGAT
GCCAGCCGCA TCGCGCATGG TGTGCCTGTC GGTGGAGAAC TTGAGCTTGT CGATGGCACG
ACGTTGTCAC ACTCGCTGTT AGGTCGACAC AGAATTTAA
 
Protein sequence
MAFHLLQRDR KGGLQLADAL SQAMTEIGHC TECRTFTEEE VCHICTNPKR QENGQICVVE 
SPADIAAVEA TGQYSGRYFV LMGHLSPLDG IGPSDIGLDV LDYRLRRGDI AEVILATNPT
VEGEATAHYI AELCKEHQVD ASRIAHGVPV GGELELVDGT TLSHSLLGRH RI