| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002874 |
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| Symbol | |
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| ID | 8556602 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 1406625 |
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| End bp | 1407419 |
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| Gene Length | 795 bp |
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| Protein Length | 264 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646405965 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_003285501 |
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| Protein GI | 262393647 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.28642 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAATCG CATTAGGTAT CGAGTACAAC GGTACAAACT ACTTTGGTTG GCAGCGCCAA
AGAGAAGTGA AAAGTGTCCA AGAAGAGCTA GAGAAAGCAT TGTCCGTTAT TGCTAATCAC
CCAGTTGAAG TGCAGTGTGC TGGTCGGACA GACGCTGGCG TGCATGGCAC AGGACAAGTT
GTGCACTTTG ATACCAACGT TACTCGAAAA ATGGTAGCTT GGACCATGGG CGCAAACGCG
AACATGCCGA GTGATATAGC GGTTCGTTGG GCTAAGGAAG TCCCAGATGA TTTCCATGCA
CGATTCTCAG CGACAGCGCG CCGTTATCGT TACATTATTT TCAATCATGC TTTACGGCCT
GGCATCTTAA ACTCTGGTGT GAGCCACTAT CATGGTGAGC TCGACGAGAA AAAAATGCAT
GAGGCAGGGC AGTATCTGCT TGGTGAAAAT GATTTTACGT CGTTTCGTGC GGCGCATTGT
CAGTCTCGTA GCCCATTTCG AAACTTGATG CATCTGAACG TTACGCGCCA TGGGAACTAT
GTGGTTATTG ATATTAAAGC TAATGCGTTC GTGCATCATA TGGTTCGTAA CATCACGGGT
AGCTTGATAA AGGTTGGACG TGGTGAAGAG AGCCCTGAAT GGATCAAATG GTTGCTAGAG
GCTAAAGATC GCAAACTAGC GGGTGCGACA GCGAAAGCGG AAGGTCTGTA CCTGGTAGAT
GTAGACTATC CAGAAGAATT TGGGTTACCT GAAGTGCCGA TAGGTCCACT GTTTTTGCCA
GATAATTTGA ACTAA
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| Protein sequence | MRIALGIEYN GTNYFGWQRQ REVKSVQEEL EKALSVIANH PVEVQCAGRT DAGVHGTGQV
VHFDTNVTRK MVAWTMGANA NMPSDIAVRW AKEVPDDFHA RFSATARRYR YIIFNHALRP
GILNSGVSHY HGELDEKKMH EAGQYLLGEN DFTSFRAAHC QSRSPFRNLM HLNVTRHGNY
VVIDIKANAF VHHMVRNITG SLIKVGRGEE SPEWIKWLLE AKDRKLAGAT AKAEGLYLVD
VDYPEEFGLP EVPIGPLFLP DNLN
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