Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_002872 |
Symbol | |
ID | 8556600 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | + |
Start bp | 1400910 |
End bp | 1401923 |
Gene Length | 1014 bp |
Protein Length | 337 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 646405963 |
Product | aspartate-semialdehyde dehydrogenase |
Protein accession | YP_003285499 |
Protein GI | 262393645 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0136] Aspartate-semialdehyde dehydrogenase |
TIGRFAM ID | [TIGR01296] aspartate-semialdehyde dehydrogenase (peptidoglycan organisms) |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0797453 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCAGC AATATAATGT TGCCATTTTA GGTGCGACCG GTGCGGTCGG TGAAACAATT TTAGAAGTGC TTCAAGAACG TAAATTCCCA GTGGGTGACA TTCACTTATT GGCAAGTGAG CGTAGCGAAG GCAAGACTTA TCGCTTTAAT GGCAAAACGG TTCGTGTACA GAACGTTGAA GAGTTTGATT GGTCTCAAGC TCATATTGCG TTGTTCTCTG CTGGTGGTGA GCTATCTGAA AAATGGGCGC CAATCGCGGC AGATGAAGGT GTTATCGTTA TCGACAACAC TTCACACTTC CGTTATGAGT ACGACATTCC TCTTGTTGTG CCAGAAGTAA ACCCAGAAGC GATTGCAGAG TTTCGTAACC GTAACATCAT CGCGAACCCA AACTGTTCGA CCATTCAAAT GCTGGTGGCA CTAAAACCAA TTCACGATGC AGTGGGTATT GAGCGTATTA ACGTATCTAC ATACCAATCC GTATCTGGTG CGGGTAAAGC GGGCATTGAC GAACTAGCAG GTCAAACGGC TAAGCTTCTA AACGGTCTGC CAGCGGATAA GAAGCAATTC TCTCAACAGA TTGCGTTTAA CTGTATTCCG CAAATCGATC AGATGATGGA AAATGGCTAC ACCAAAGAAG AAATGAAAAT GGTGTGGGAA ACACAGAAGA TCTTTAACGA TCCATCAATC ACAGTAAACC CAACGTGTGT GCGTGTGCCG GTATTCTATG GTCATGCTGA AGCGCTTCAC ATTGAGACTC GCTCTCCAAT CGATGCACAA GAAGTTGTTA ACTTGCTTGA GCAAACAGAA GGCATTGAAG TCTTCCACGG TGATGACTTC CCGACACAAG TGCGTGATGC GGGCGGTAAA GATCATGTTA TGGTTGGTCG AATCCGCAAC GATATCAGCC ACCATAGTGG TGTAAACTTG TGGGTTGTGG CGGATAACGT GCGTAAAGGC GCAGCAACTA ACGCGGTACA AATCGCTGAA GTTCTGATCC GCGATTACTA CTAA
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Protein sequence | MSQQYNVAIL GATGAVGETI LEVLQERKFP VGDIHLLASE RSEGKTYRFN GKTVRVQNVE EFDWSQAHIA LFSAGGELSE KWAPIAADEG VIVIDNTSHF RYEYDIPLVV PEVNPEAIAE FRNRNIIANP NCSTIQMLVA LKPIHDAVGI ERINVSTYQS VSGAGKAGID ELAGQTAKLL NGLPADKKQF SQQIAFNCIP QIDQMMENGY TKEEMKMVWE TQKIFNDPSI TVNPTCVRVP VFYGHAEALH IETRSPIDAQ EVVNLLEQTE GIEVFHGDDF PTQVRDAGGK DHVMVGRIRN DISHHSGVNL WVVADNVRKG AATNAVQIAE VLIRDYY
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