Gene VEA_002851 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_002851 
Symbol 
ID8556579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp1377848 
End bp1379176 
Gene Length1329 bp 
Protein Length442 aa 
Translation table11 
GC content47% 
IMG OID646405942 
Productlong-chain fatty acid transport protein 
Protein accessionYP_003285478 
Protein GI262393624 
COG category[I] Lipid transport and metabolism 
COG ID[COG2067] Long-chain fatty acid transport protein 
TIGRFAM ID[TIGR03304] outer membrane insertion C-terminal signal 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACCA ACAAGACTCT TCTATCAACA GCAGTGGCAT TAAGCCTACT TGGCACAACG 
GGCATGGCTA ACGCAGCAGG TTTCCAACTT GCTGAATATT CTGCAACAGG CCTAGGTCGA
GCATATGCTG GTGAAGCAGC AATGGCTGAC AACGCAAGTG CACAATGGCG TAACCCAGCA
ATGCTAACTT ATTTGGAAGG CACTCAAGTG TCCGTTGGTG CAATCTATGT GAACCCAAAT
ATTGATATTG AAGGTGATGT AAACTTCCAC GGTAGTACTT CTTCTGCATC TTCAGATGAT
TTCGCACATG ATGCAATCAT TCCAAACTTC TACCTATCAC ACCAATACAA TGAGAAATTC
GCGATTGGTT TGGCATTTGG CACCAACTAC GGTATGGAAA CCGATTTAGG GAAAGGCTTT
GGTGCATCAC ACTTCGGTAA CGAAGCAAGC GTAACGACAA TGGAAGCGAA CTTAAACGCA
GCTTACAAAG TCAATGAATC AATCAGCGTT GGTGGTGGTA TCCGTTACAT CATCGGCGAA
GGCAGCTTTG GCGCAGCAGC TCCTAAGAAT AACGTTGTAG GAAAGCACCC TTTAACTGGC
GATCCTATCA GTGTTCCTCA AGGTACCGCT CTAAAATACA TGGAAGGTGA CGATACCGCT
TGGGGCTGGC AAGTTGGTAC TGCATGGCAG ATCAATGAAA ATAACCGTAT CGGCTTCGCG
TACAAATCTG AAGTTGAACT GAAGCTTGAA GGCCATGCTG AAGGTCTAGG TTTTGGCTTC
GGTACTTCTG AGCTTCCACA ACTACGTGAC AACGGCTACA TGTACCTAAA CCTGCCTGCA
ACGGCTGAGT TGGCAAGCTT CCACCAAGTA ACAGACCAAC TTGCGTTACA CGCAAGCTTT
AACTGGACGG ATTGGAGCTC TTTCGATAAA TTGGAAGCAC GCCTAGATAC CGCTGGCACG
CATATGGTTA AAGTAGAAAA CTGGGAAGAT AACTACCGCT TTGCTGTTGG TGCCACTTAC
CAGCTTGATC CTAAGCTAGC GCTACGTACT GGTATTGCAT ACGATACTTC AGCGGTAAGC
GACAAAAACC GTACGATCAC TATTCCAGAA ACTGACCGTA CTTGGCTAAG TATTGGTGCA
ACGTACGATT GGACAAAAGA CTTCAGCCTA GACGCTGGCT TCACCTATAT TTTCGCGAAA
GACGCACCAA TCGTTGAGTC TCGTGGTTAC AAGTCAGACG ACGCTGCAGA ACAAGTCGGC
GGCCAATTCG TAGGCGAAAC TACGGGTAAT GTTTGGCTAA TCGGTGTTCA AGCAAACTAC
CGTTTCTAA
 
Protein sequence
MKTNKTLLST AVALSLLGTT GMANAAGFQL AEYSATGLGR AYAGEAAMAD NASAQWRNPA 
MLTYLEGTQV SVGAIYVNPN IDIEGDVNFH GSTSSASSDD FAHDAIIPNF YLSHQYNEKF
AIGLAFGTNY GMETDLGKGF GASHFGNEAS VTTMEANLNA AYKVNESISV GGGIRYIIGE
GSFGAAAPKN NVVGKHPLTG DPISVPQGTA LKYMEGDDTA WGWQVGTAWQ INENNRIGFA
YKSEVELKLE GHAEGLGFGF GTSELPQLRD NGYMYLNLPA TAELASFHQV TDQLALHASF
NWTDWSSFDK LEARLDTAGT HMVKVENWED NYRFAVGATY QLDPKLALRT GIAYDTSAVS
DKNRTITIPE TDRTWLSIGA TYDWTKDFSL DAGFTYIFAK DAPIVESRGY KSDDAAEQVG
GQFVGETTGN VWLIGVQANY RF