| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002849 |
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| Symbol | |
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| ID | 8556577 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 1375569 |
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| End bp | 1376783 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646405940 |
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| Product | cytochrome c heme lyase subunit CcmH |
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| Protein accession | YP_003285476 |
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| Protein GI | 262393622 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4235] Cytochrome c biogenesis factor |
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| TIGRFAM ID | [TIGR03142] cytochrome c-type biogenesis protein CcmI |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACTAT TTTGGATTTC CACCGTTGCT CTTACGCTTA TTGCTTGTGC GCTGGTGGCT
TTGCCGTTGC TTAAACAAAA AGCGAACAAT GATGATGTGT TACGCGATGA GCTCAACAAG
GCTTTCTATA AAGACCGTTT ATCTGAACTT GCAGAAGAAA CTGACGAAGG TCTGGTGGAG
AGCGAAGACG AACTGATTTC TGATCTAAAG CAGTCTCTCC TTGACGATAT TCCGGGTGAT
AAAGCGCAAA AGGAAACCAA GGTTTCACCA ATCGCGGTTT TAGTTCCATC GGTAATTCTG
ACGGTGGCGT TGAGCTATGG CTTGTATTAC AAATTTGGCG CGTCAGACGA TATTGTTCAA
TGGCAAGAAG TGTCTGCAAA TCTACCTGAG TTATCGAAAA AGCTGATGTC GGCTTCTTCT
GATCCGTTGA GTGACGATGA AATGGCGGAT TTGACCCTTG CCCTTCGAAC TCGCTTACAT
TACCAGCCGG AAGACTCGAC AGGTTGGTTA CTGCTAGGTC GTATTGCGTT AGCAAATCGT
GATGTCACGA CTGCTATCGA TGCGATGGAA AAGTCATATC GCCTAGAGCC CAAAGATCCT
GATGTGATGT TGGGTTATGC ACAAGCTCTG ATGCTGTCTC AAGAGGAAAT GGATCAAGCG
ACGGCTCGCT CATTACTCGG CAAGCTGATG CAGCAAGACT ATGTCGATCT GCGTGTGTTT
TCTTTGTTAG CGTTCGATGC GTTTGAGCGT CAAGACTTCC CGGCAGCCAT CAAGTACTGG
GGAATCATGC AGCAAATGAT TGGTCCAGAA GATAGCCGCT ACGAGATGTT GTCACGCAGT
ATTGAGAGTG CTCGTAAGCA AATGGGCGAA GCGGTTTCAC CGGATAAGAG TGTCGCTGTG
ACAATTAATG TGGCACCAAA TGCTCAGTTG GATCCAAACG CAGTTCTGAT TGTGTCGGTA
CATCGTGCAG ATGGCTCACC AATGCCTGTT GCGGCAGCTC GCTATCCGCT GGGTACTTTC
CCTCGTACAG TCGTATTAGA TGATGGTAAT GCCATGATGC AGGGGCAAAA ACTATCTTCA
CTCGAAAAGT TAATCGTCCG TGTGCGTGTG GACTCTGACG GTAACGTAGC AACGCGTGAC
CAAGATTGGC ACGGGGAGAG TGACGTCGTT GAATTTGGCA CGCCGGTTGA AGTGACCATT
GACCAGCAAT ATTAA
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| Protein sequence | MTLFWISTVA LTLIACALVA LPLLKQKANN DDVLRDELNK AFYKDRLSEL AEETDEGLVE
SEDELISDLK QSLLDDIPGD KAQKETKVSP IAVLVPSVIL TVALSYGLYY KFGASDDIVQ
WQEVSANLPE LSKKLMSASS DPLSDDEMAD LTLALRTRLH YQPEDSTGWL LLGRIALANR
DVTTAIDAME KSYRLEPKDP DVMLGYAQAL MLSQEEMDQA TARSLLGKLM QQDYVDLRVF
SLLAFDAFER QDFPAAIKYW GIMQQMIGPE DSRYEMLSRS IESARKQMGE AVSPDKSVAV
TINVAPNAQL DPNAVLIVSV HRADGSPMPV AAARYPLGTF PRTVVLDDGN AMMQGQKLSS
LEKLIVRVRV DSDGNVATRD QDWHGESDVV EFGTPVEVTI DQQY
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