| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002844 |
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| Symbol | |
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| ID | 8556572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 1371870 |
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| End bp | 1372076 |
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| Gene Length | 207 bp |
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| Protein Length | 68 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 646405935 |
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| Product | cytochrome c-type biogenesis protein CcmD interacts with CcmCE |
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| Protein accession | YP_003285471 |
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| Protein GI | 262393617 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3114] Heme exporter protein D |
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| TIGRFAM ID | [TIGR03141] heme exporter protein CcmD |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCATTTTG AATCTCTGAG CGACTTTTTT GCCATGGGTG GCTACGCATC ATACGTATGG
AGTGCGTTTG GTATTACTTT CTTATCCATG CTGATTCTTC TGATCACTAG CCTTCGCCGC
GGTGATGCAT TATTGAAAGA AGTGAAAGCA AAAATTGACC GTCAAGCTCG TATCGACGCA
GCGAAGAACA TGGAGAACAC CTTATGA
|
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| Protein sequence | MHFESLSDFF AMGGYASYVW SAFGITFLSM LILLITSLRR GDALLKEVKA KIDRQARIDA
AKNMENTL
|
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