| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002842 |
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| Symbol | |
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| ID | 8556570 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 1370337 |
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| End bp | 1371005 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 646405933 |
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| Product | ABC transporter involved in cytochrome c biogenesis CcmB subunit |
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| Protein accession | YP_003285469 |
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| Protein GI | 262393615 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG2386] ABC-type transport system involved in cytochrome c biogenesis, permease component |
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| TIGRFAM ID | [TIGR01190] heme exporter protein CcmB |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGATTCCAT CTATGACCAC CATCATTCGC CGCGAGCTAT TGATAGCATT TCGCCGTCAG
GCAGACATTC TGAACCCGCT TTGGTTCTTT ATTATTGTTA TTACTCTGTT TCCTCTTAGT
ATCGGGCCTG AACCAAATTT GTTAGCACGT ATTGCAGCGG GCATTGTTTG GGTTGCCGCA
TTGCTATCCG CCTTATTATC ATTAGAGCGT CTATTTCGTG ATGATTTTCA AGACGGTGCA
TTGGAACAAA TGATGCTAAT GCCGATTCCA TTGCAACTTG TAGTGGTTTC AAAGGTCATA
GCACATTGGT TGTTAACAGG GTTACCTCTG ATCCTAATTA GCCCATTATT GGCGGTTTTA
CTTTCGCTTG ATTTCAATAC TTGGTTATCT GTTGTACTAA CCTTGATGAT CGGTACACCG
ACACTAAGTT TTATTGGAGC TATTGGTGTG GCTTTGACGG TTGGGTTGCA AAAGGGGGGC
GTTCTTTTGA GTTTGCTTAT TCTTCCGCTC TACATCCCAA TTTTGATTTT CGCAACATCA
GCAATTGATG CCGCCGCGCT TGGTATGGCG TATAACGGTC AACTAGCAAT TTTAGGTGCG
ATGCTAATGG GAGCGATGAC GTTAACGCCT TTTGCCATTA GTGCCGCATT GAGAGTTAGT
GTTAACTAA
|
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| Protein sequence | MIPSMTTIIR RELLIAFRRQ ADILNPLWFF IIVITLFPLS IGPEPNLLAR IAAGIVWVAA
LLSALLSLER LFRDDFQDGA LEQMMLMPIP LQLVVVSKVI AHWLLTGLPL ILISPLLAVL
LSLDFNTWLS VVLTLMIGTP TLSFIGAIGV ALTVGLQKGG VLLSLLILPL YIPILIFATS
AIDAAALGMA YNGQLAILGA MLMGAMTLTP FAISAALRVS VN
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