| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002832 |
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| Symbol | |
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| ID | 8556560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 1361140 |
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| End bp | 1361874 |
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| Gene Length | 735 bp |
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| Protein Length | 244 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 646405923 |
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| Product | RNA polymerase sigma factor for flagellar operon |
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| Protein accession | YP_003285459 |
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| Protein GI | 262393605 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000415282 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAATAAAG CGATAACCTA TGACCAACAT GGCAAGTTTA ATAGCCAGCA AGCGTTTATA
GAGCGCTACT CAGTGTTGGT TAAGCGCATT GCTCACCACC TATTAGGCCG TTTACCGCCG
AGTGTTCAGG TAGAGGATTT AATTCAGGCC GGCATGATCG GTCTTATCGA AGCTCAGCAG
AATTATGATG GTTCTAAAGG TGCGAGCTTT GAAACTTATG CAGGTATCCG TATTCGTGGC
GCAATGTTAG ATGACATGCG CAAAGGCGAT TGGGTACCGC GTTCTGTTCA TAAAAATAAT
CGAGAGATTA ACCAAGCGAT TGCGGAACTG GAAGGCGAAT TAAATAGAGA TCCTACTGAT
TCTGAAGTAG CCACGCATCT CGGTATGACA CTGGATCAAT ATCATAGTGC TCTGACCGAT
ATCAACTGCT CAAAATTAGT CGGTATTGAA GATTTAGGCG TTTCTGATGA TGTGATTTCA
CCTGCAGATG AAACTGATGA CAGTAACCCA TTCAAAGGGG TTGCCGATGA ATCATTTCGA
AAAGCACTGG TTGAATCAAT AAAACAGATT CCAGAGCGTG AAGCTTTGGT TCTTTCGCTT
TATTATGATG AAGAACTCAA TTTGAAAGAA ATTGGCGATG TGTTAGGCGT AAGCGAATCT
CGCGTAAGTC AAATACTGAG TCAAGCGATG CAACGTTTGC GCACCAAGCT CAGTGCGTGG
ACACAAAATG ACTAA
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| Protein sequence | MNKAITYDQH GKFNSQQAFI ERYSVLVKRI AHHLLGRLPP SVQVEDLIQA GMIGLIEAQQ
NYDGSKGASF ETYAGIRIRG AMLDDMRKGD WVPRSVHKNN REINQAIAEL EGELNRDPTD
SEVATHLGMT LDQYHSALTD INCSKLVGIE DLGVSDDVIS PADETDDSNP FKGVADESFR
KALVESIKQI PEREALVLSL YYDEELNLKE IGDVLGVSES RVSQILSQAM QRLRTKLSAW
TQND
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