Gene VEA_002828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_002828 
Symbol 
ID8556556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp1355259 
End bp1356389 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content47% 
IMG OID646405919 
Productflagellar biosynthesis protein FlhB 
Protein accessionYP_003285455 
Protein GI262393601 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1377] Flagellar biosynthesis pathway, component FlhB 
TIGRFAM ID[TIGR00328] flagellar biosynthetic protein FlhB 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCAGAAT CAGACGGTCA GGAACGCACC GAAGAAGCCA CGCCCCGACG GTTACAACAA 
GCCAGAGAAA AGGGGCAGGT TGCTCGGTCT AAAGAACTTG CATCAGCATC TGTACTGATC
GTTGGCGCCA TTTCACTGAT GTGGTTTGGC GAGGCGTTAG CACGTTCATT GTTTTCCATC
ATGAGCCGTT TATTTGATCT TCAACGAGAA GAGATTTTTG ATACGGCAAA GCTATTTGAC
ATTGCTTTAG GGGCGATGAC CGATTTGTTG TTCCCTCTAT TTTTGGTGCT AGCTACGTTG
TTTACTGCCG CCATGATTGG TGCTGCGGGT GTGGGAGGAA TCAGTTTTTC TGCTCAAGCC
GCTATGCCAA AGCTGTCGAA AATGAATCCG CTTAGCGGTT TAAAGCGGAT GGTCGGAATG
CAAAGCTGGG TGGAGTTGAT CAAATCAATA CTCAAAGTGG TTTTGGTTAC TGGTGTGGCG
ATCTATTTGA TCCAAGCATC GCAGGCGGAT CTGATTCAAT TAAGTATGGA TGTGTATCCG
CAAAACATCT TCCATGCTTT AGATATTCTG CTGAACTTTA TCTTGTTGAT CAGCTGTTCG
CTGTTGATCG TGGTTGCCAT CGATATTCCA TTTCAAATCT GGCAGCACGC TGATCAGTTA
AAAATGACCA AGCAAGAAGT CAAAGACGAA TATAAAGAAA CCGAGGGTAA GCCAGAGGTC
AAAGGACGCA TTCGTATGCT GCAAAGGGAA GCGGCTCAAC GTCGTATGAT GGCAGACGTT
CCTCAGGCTG ATGTTATTGT TACCAACCCA GAGCACTTTT CGGTTGCGCT TCGTTATAAA
CAGAAGACAG ACCGTGCGCC GGTAGTGATC GCTAAAGGCA CCGATCACAT GGCAATGAAG
ATTCGAGAAG TCGCCCGAGA GCATGACATC ACAATTGTAC CTGCTCCGCC ACTTGCTCGT
GCGCTGTACC ATACTACCGA GCTTGAACAA GAGATCCCCG ATGGATTATT TACTGCGGTG
GCTCAGGTTT TGGCATTTGT ATTCCAGTTG AAACAATACC GAAAACGAGG TGGACAGCGC
CCCAAAATTC AGGATTACGA TTTGCCAATC CCGCCAGAAC ACCGGCACTA A
 
Protein sequence
MAESDGQERT EEATPRRLQQ AREKGQVARS KELASASVLI VGAISLMWFG EALARSLFSI 
MSRLFDLQRE EIFDTAKLFD IALGAMTDLL FPLFLVLATL FTAAMIGAAG VGGISFSAQA
AMPKLSKMNP LSGLKRMVGM QSWVELIKSI LKVVLVTGVA IYLIQASQAD LIQLSMDVYP
QNIFHALDIL LNFILLISCS LLIVVAIDIP FQIWQHADQL KMTKQEVKDE YKETEGKPEV
KGRIRMLQRE AAQRRMMADV PQADVIVTNP EHFSVALRYK QKTDRAPVVI AKGTDHMAMK
IREVAREHDI TIVPAPPLAR ALYHTTELEQ EIPDGLFTAV AQVLAFVFQL KQYRKRGGQR
PKIQDYDLPI PPEHRH