Gene VEA_002825 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_002825 
Symbol 
ID8556553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp1353301 
End bp1354170 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content47% 
IMG OID646405916 
Productflagellar biosynthesis protein FliP 
Protein accessionYP_003285452 
Protein GI262393598 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1338] Flagellar biosynthesis pathway, component FliP 
TIGRFAM ID[TIGR01103] flagellar biosynthetic protein FliP 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAAGG GTAACCCGAT TCGTTTGCTC CTGAGCACGT TGTTGCTTTT CGTCGGCGTG 
CTGTTTTCTT CATTTTCGTT TGCTGAGGCA GAGGAGTCTG CTCTGCCTGA CAACTTGGCT
GATGGAAGTA GCGTCACTGT TCAGGCGATG CAAAGTGATA CTGGCGCCAG TCGTGCTATG
TCCGTTTCTA GTGGCGGTGG TATTCCAGCA TTCACCATGA CCACGAACCC AGATGGCAGT
GAAGATTACT CGGTTACGCT ACAAATCCTA GCGTTAATGA CCATGCTTGG CTTCTTGCCT
GCCATGGTGA TTCTAATGAC GTCGTTTACT CGAATTGTTG TGGTGATGTC GATATTGCGT
CAGGCAATGG GTTTGCAACA AACGCCGTCT AATCAGGTCA TCATTGGTAT AGCGCTGTTT
TTGACCTTCT TTGTTATGTC TCCCGTCCTG AACGAAATCA ACGATAAAGC CGTTCAGCCT
TATTTGAACG AGCAAGTCAC GGCTCGAGAA GCATTTGATG CTGCACAAGC GCCAATGAAA
GCGTTCATGC TTAAACAGAC CCGAATCAAA GACTTGGAGA CGTTTGTAAC CATGTCAGGA
GAGCAAGTTG AGAACCCAGA AGATGTGTCG ATGGCGGTGT TGATTCCGGC TTTCATCACC
TCGGAGCTAA AAACTGCATT CCAGATTGGC TTTATGCTCT TCTTGCCGTT TTTGATTATT
GACCTCGTGG TAGCGTCGGT ACTGATGGCA ATGGGTATGA TGATGTTGTC ACCAATGATT
GTTTCGTTGC CGTTCAAGTT GATGCTGTTT GTATTGGTCG ATGGCTGGAA CTTGATACTT
TCGACACTCG CGGGCAGTTT TGCCCTTTAG
 
Protein sequence
MTKGNPIRLL LSTLLLFVGV LFSSFSFAEA EESALPDNLA DGSSVTVQAM QSDTGASRAM 
SVSSGGGIPA FTMTTNPDGS EDYSVTLQIL ALMTMLGFLP AMVILMTSFT RIVVVMSILR
QAMGLQQTPS NQVIIGIALF LTFFVMSPVL NEINDKAVQP YLNEQVTARE AFDAAQAPMK
AFMLKQTRIK DLETFVTMSG EQVENPEDVS MAVLIPAFIT SELKTAFQIG FMLFLPFLII
DLVVASVLMA MGMMMLSPMI VSLPFKLMLF VLVDGWNLIL STLAGSFAL