Gene VEA_002823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_002823 
Symbol 
ID8556551 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp1352489 
End bp1352899 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content48% 
IMG OID646405914 
Productflagellar motor switch protein FliN 
Protein accessionYP_003285450 
Protein GI262393596 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1886] Flagellar motor switch/type III secretory pathway protein 
TIGRFAM ID[TIGR02480] flagellar motor switch protein FliN 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACCAA GTGACGATCA AAAGCTAGCA GATGAATGGG CAGCCGCTCT TGGCGAAGAC 
CCGTCTGCAC CTTCTGTTGA TGTAGATGAA GTATTGGCCG CGCCACTGGA AGAGCTAAAA
GACACTTCAA GCCCAATTAC CGAAGATGAG CGTCGTAAAC TCGACACCAT CATGGATATT
CCGGTGACGA TTTCGATGGA AGTCGGTCGT TCACAAATCA GCATTCGGAA CTTATTGCAG
TTGAACCAAG GTTCGGTTGT TGAGTTGGAT CGTCTAGCGG GCGAGTCATT GGACGTATTA
GTCAACGGTA CACTGATTGC GCATGGCGAA GTCGTGGTCG TGAACGATAA GTTTGGTATC
CGTTTGACGG ATGTGATCAG CCAAACTGAA CGAATTAAGA AGCTACGTTA A
 
Protein sequence
MEPSDDQKLA DEWAAALGED PSAPSVDVDE VLAAPLEELK DTSSPITEDE RRKLDTIMDI 
PVTISMEVGR SQISIRNLLQ LNQGSVVELD RLAGESLDVL VNGTLIAHGE VVVVNDKFGI
RLTDVISQTE RIKKLR