Gene VEA_002808 details

Gene Information

• Locus tag: VEA_002808
• ID: 8556536
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Vibrio sp. Ex25
• Kingdom: Bacteria
• Replicon accession: NC_013456
• Strand: +
• Start bp: 1335694
• End bp: 1337685
• Gene Length: 1992 bp
• Protein Length: 663 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 646405899
• Product: flagellar hook-associated protein FliD
• Protein accession: YP_003285435
• Protein GI: 262393581
• COG category: [N] Cell motility
• COG ID: [COG1345] Flagellar capping protein

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTTTAG GCCCTTTGGG GATGTCTGGC GGCATGGATA TCAATTCCAT GGTCAGCAAA 
ATTGTGGATG CCGAACGCGT ACCAAAGCAG CAACGCATTG ACAACGAGCG CACGACAATT 
AATGCCAGTA TCAGTGCCTA TGGGCGACTC AGAGAATCAC TGGATACGAT GAAAAATCTT 
ATGGCGAACT TTCGTCAAGA GAAAGCGTTT GCCGTTCGTA CTGTTGAAAC GACAGACGAC 
AATATCGTAT CTGCTACGGC AACCACAGAT GCTATCGCTG GCAAATATGC TATCGATGTG 
TTGCAGCTTG CCCAGAGCCA CAAAGTCGCT TCTGACGTAC TGCCAGAAGA CGCAAAGTTT 
GGCCCTGGTA AGCTGCAGAT TTCGCTTGGT GATGACACCT TCAACGTGAA CGTTCGTTCG 
AGCTCCAAGC TCGCAGACGT CGTACGCGGC ATCAACGGCT CAAAAGACAA CCCCGGTGTT 
CGAGCATCTC TCATTAACGA CGTTGAAGGA CCACGCCTTA TCCTTGCCTC AAATCTCTCT 
GGTAAGGATC ATCAAATCAG AGTCAGTGTG GAGGCCGACA AAGGCAACCC TCTAAAATAT 
TTCGAATATC AAACACTTGA AGACCGTGTT AACGCGCTTG AAGAAGCTCG TTCAGCGGCG 
GAAGAAGTGT TAGGTCCTCT TCAATTCCCC GAGCAACCAG TGGAACTGGA TGCAAACGGC 
AATCCTCTAC CTCCAGAAGA GCAAAAAGCG GCAGAAAATG GACAAGATGA TGGCTCCCAA 
GAGCCAATCT CTGCTGCGGG TGCGGAAGCT GCTAAAGCTG GGCAGGAAGC GATTGATGAA 
GCCAACCGAC GTGCGAGTTT GCGCCCTGAA GACCGAATTC CAGGGTGGAC AGAAACTGCG 
TCAGGCACTT TGCTGGATTC TTATGAAGAA CCAGAGCTCG AACTCGACGA GAAAGCAATA 
GAGAAGGCAC CAGATGTACC GGGTTGGAGT AATGCCGCAT CAGGTACATT AACCGACTCT 
TACGTTACGA CGAAAGAGGC CAAGCAGCTT CTTGAGCAAG AAAAAGCTGA AATTGAGCAA 
AAAATTGCGA GTGAAAAACA AGCGCTAGAC GCAAAAGTTG AACGTGGTGA ATTGACCGAA 
GAGCAAGCGA AACAAATTCA TCGCGCTAAG CTGGATCCTC AAGAACGCGA ACGTTTAGAA 
AAAATTGATG AAGCAGAAGC GAAAATCGCA AAAGCGCAAT CTGCTTTTGA AGAATACCTT 
GGTATGACAG AGGTACAAGC AGGGCAAGAT TCAGAAGTTC TGCTTGATGG AGTAGCAAAG 
CTTTCTAGTC ACAACAATGT GATTGAAGAT GCCATAGAAG GTGTTGATTT AACACTTAAA 
GGCAAATCAG AACCGAACAA GCCACCTGCT GAAATTGGCG TCGAATACGA CCGTCAGAGT 
GTGCGTAACG ACATCGAAAA CTTTGTTGCG GCGTACAACT CGTTTTATCA AACGTCTCAA 
GCGTTGGCGA GTGTGGATCC GGTTACTGGT CAAAAAGGCC CGTTGTCGGG TGACAGTACC 
GTACGCAGCG CAGACTCACG ATTAAAATCG GTATTTTCCA CTCAAATTGA TAAAGCGCCT 
GAAAACCTAA AGTCATTAAC TGAATTTGGC ATTACTACCA CGCGTCAAGG CACCCTAGAA 
ATCAACTATG ACATGTTGGA TCGTCAGTTG AACAACAACT TCAACGAGCT AGAAAAGTTC 
TTCGGTGGCA ACACAGGTTT TGCTAAACGA GTCGAAGACG CGATTCATGG TATTACAGGC 
ATTACAGGCA GCATTCGTAC TCGAGAAAAA AGTCTCACAG AACAAAATTA TCGTTTGAGT 
GATGATCAAG CGGCATTAGA TCGCCGCATG GAAAGCCTAG AAAAGCGCAC TCACGCGAAG 
TTTACCGCCA TGCAAGATGC GACTGGCAAA ATGCAAGGTC AGTTAGGTGC CTTAATGAGT 
GCGTTGGGTT AA 

 

Protein sequence

MSLGPLGMSG GMDINSMVSK IVDAERVPKQ QRIDNERTTI NASISAYGRL RESLDTMKNL 
MANFRQEKAF AVRTVETTDD NIVSATATTD AIAGKYAIDV LQLAQSHKVA SDVLPEDAKF 
GPGKLQISLG DDTFNVNVRS SSKLADVVRG INGSKDNPGV RASLINDVEG PRLILASNLS 
GKDHQIRVSV EADKGNPLKY FEYQTLEDRV NALEEARSAA EEVLGPLQFP EQPVELDANG 
NPLPPEEQKA AENGQDDGSQ EPISAAGAEA AKAGQEAIDE ANRRASLRPE DRIPGWTETA 
SGTLLDSYEE PELELDEKAI EKAPDVPGWS NAASGTLTDS YVTTKEAKQL LEQEKAEIEQ 
KIASEKQALD AKVERGELTE EQAKQIHRAK LDPQERERLE KIDEAEAKIA KAQSAFEEYL 
GMTEVQAGQD SEVLLDGVAK LSSHNNVIED AIEGVDLTLK GKSEPNKPPA EIGVEYDRQS 
VRNDIENFVA AYNSFYQTSQ ALASVDPVTG QKGPLSGDST VRSADSRLKS VFSTQIDKAP 
ENLKSLTEFG ITTTRQGTLE INYDMLDRQL NNNFNELEKF FGGNTGFAKR VEDAIHGITG 
ITGSIRTREK SLTEQNYRLS DDQAALDRRM ESLEKRTHAK FTAMQDATGK MQGQLGALMS 
ALG