| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002797 |
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| Symbol | |
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| ID | 8556525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 1326663 |
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| End bp | 1327799 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 646405888 |
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| Product | N-succinyl-L,L-diaminopimelate desuccinylase |
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| Protein accession | YP_003285424 |
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| Protein GI | 262393570 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAGACA GTCCAGTATT GGCACTTGCT AAAGATCTGA TCAGTAGACA ATCTGTAACG
CCGGAAGACG CAGGTTGTCA GGATTTGATG ATCGAGCGCT TAAAAGCACT CGGGTTTGAA
ATTGAAGTGA TGGTATTTGA AGACACCACG AACTTCTGGG CTCGCCGTGG TTCAGAAGCG
CCACTATTTG CGTTCGCTGG CCACACCGAT GTGGTACCTG CTGGCAAACT GGAGCACTGG
GATACACATC CGTTTGAACC AACTATTATT GATGGTTACC TACACGGTCG CGGTGCAGCG
GACATGAAAG GGTCGCTAGC TGCTATGGTC GTTGCTGTCG AACGCTTCAT TGCAGAAAAC
CCAGACCACA AAGGCTCAAT CGGCTTTCTA ATTACGTCGG ATGAAGAAGG ACCATTTATC
AATGGTACCG TTCGTGTTGT AGAAACGTTG ATGGCACGTG GCGAAAATAT CGACATGTGT
ATCGTCGGTG AACCATCCAG CACCGAAGTG GTTGGCGATG TGGTGAAAAA TGGACGTCGC
GGTTCTATCA CGGGCGATTT AACGGTAAAA GGAACACAAG GCCACGTGGC ATATCCTCAC
CTAGCCAATA ACCCTGTGCA CGAGTCTCTA CTCGCGATTC ATGAACTCGC AACAACAGAG
TGGGACAAAG GAAATGATTA TTTCCCACCA ACCAGCTTCC AGATCCCGAA CGTATCGGCT
GGCACTGGTG CGTCTAACGT CATTCCTGGC GAGTTCCATG TTCAGTTCAA CCTACGTTTT
AGTACTGAGC TTAACAATGA CGCAATTGTT CAGCGTGTTA CCGAAACATT GGACAAGCAT
GAGCTGGACT ACGATCTAAA ATGGACATTC AACGGCGACC CATTCCTGAC CGATACAGGC
GCGCTGCTAG ACGCGGTTGT AGCTGCTGTG GCCGAAGTCA ATGATACGAA GCCAGCACTA
CTTACAACTG GCGGTACGTC TGATGGTCGC TTTATCGCTC GAATGGGTGG TCAAGTCGTA
GAGTTAGGCC CTGTTAACGC TACGATTCAT AAAGTGAACG AATGCGTGAA AGTGGACGAT
CTAGAAAAGT TGACTGACAT GTACGAGAAC ACGTTGAAAC ACCTGTTAGC GAAGTAA
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| Protein sequence | MTDSPVLALA KDLISRQSVT PEDAGCQDLM IERLKALGFE IEVMVFEDTT NFWARRGSEA
PLFAFAGHTD VVPAGKLEHW DTHPFEPTII DGYLHGRGAA DMKGSLAAMV VAVERFIAEN
PDHKGSIGFL ITSDEEGPFI NGTVRVVETL MARGENIDMC IVGEPSSTEV VGDVVKNGRR
GSITGDLTVK GTQGHVAYPH LANNPVHESL LAIHELATTE WDKGNDYFPP TSFQIPNVSA
GTGASNVIPG EFHVQFNLRF STELNNDAIV QRVTETLDKH ELDYDLKWTF NGDPFLTDTG
ALLDAVVAAV AEVNDTKPAL LTTGGTSDGR FIARMGGQVV ELGPVNATIH KVNECVKVDD
LEKLTDMYEN TLKHLLAK
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