Gene VEA_002772 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_002772 
Symbol 
ID8556500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp1300856 
End bp1301320 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content47% 
IMG OID646405863 
Productribonuclease HI 
Protein accessionYP_003285399 
Protein GI262393545 
COG category[L] Replication, recombination and repair 
COG ID[COG0328] Ribonuclease HI 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.720035 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCAAAC ACGTTGAGAT TTTCACTGAC GGTTCTTGTT TAGGTAACCC AGGACCAGGT 
GGTTACGGCA TTGTATTGCG TTACAAAGAC GTAGAAAAGA CGCTTTCCAA AGGCTACACG
TTAACCACCA ACAACCGTAT GGAAATGTTG GCGGCTGTCG TCGCGCTGCA GACGTTAAAA
CAACCTTGCA AAGTCACTTT AACGACTGAC AGCCAATATG TGCGCCAAGG TATTACTCAG
TGGATCCATA ACTGGAAGAA GCGTGGCTGG AAAACAGCGG ATAAAAAACC CGTGAAGAAT
GCCGATCTAT GGCAAGCTCT AGACAAAGAA ACTGCACGCC ATCAAGTTGA ATGGCACTGG
GTAAAAGGCC ACGCTGGTCA TCGTGAGAAT GAAATTTGTG ATGAGCTAGC CCGTACCGCC
GCAGAAAACC CAACCGAGGA AGATACTGGT TACCAACCCT CTTAA
 
Protein sequence
MTKHVEIFTD GSCLGNPGPG GYGIVLRYKD VEKTLSKGYT LTTNNRMEML AAVVALQTLK 
QPCKVTLTTD SQYVRQGITQ WIHNWKKRGW KTADKKPVKN ADLWQALDKE TARHQVEWHW
VKGHAGHREN EICDELARTA AENPTEEDTG YQPS