Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_002772 |
Symbol | |
ID | 8556500 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | - |
Start bp | 1300856 |
End bp | 1301320 |
Gene Length | 465 bp |
Protein Length | 154 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 646405863 |
Product | ribonuclease HI |
Protein accession | YP_003285399 |
Protein GI | 262393545 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0328] Ribonuclease HI |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.720035 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCAAAC ACGTTGAGAT TTTCACTGAC GGTTCTTGTT TAGGTAACCC AGGACCAGGT GGTTACGGCA TTGTATTGCG TTACAAAGAC GTAGAAAAGA CGCTTTCCAA AGGCTACACG TTAACCACCA ACAACCGTAT GGAAATGTTG GCGGCTGTCG TCGCGCTGCA GACGTTAAAA CAACCTTGCA AAGTCACTTT AACGACTGAC AGCCAATATG TGCGCCAAGG TATTACTCAG TGGATCCATA ACTGGAAGAA GCGTGGCTGG AAAACAGCGG ATAAAAAACC CGTGAAGAAT GCCGATCTAT GGCAAGCTCT AGACAAAGAA ACTGCACGCC ATCAAGTTGA ATGGCACTGG GTAAAAGGCC ACGCTGGTCA TCGTGAGAAT GAAATTTGTG ATGAGCTAGC CCGTACCGCC GCAGAAAACC CAACCGAGGA AGATACTGGT TACCAACCCT CTTAA
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Protein sequence | MTKHVEIFTD GSCLGNPGPG GYGIVLRYKD VEKTLSKGYT LTTNNRMEML AAVVALQTLK QPCKVTLTTD SQYVRQGITQ WIHNWKKRGW KTADKKPVKN ADLWQALDKE TARHQVEWHW VKGHAGHREN EICDELARTA AENPTEEDTG YQPS
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