| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002751 |
|---|
| Symbol | |
|---|
| ID | 8556479 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | + |
|---|
| Start bp | 1278130 |
|---|
| End bp | 1278900 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 646405842 |
|---|
| Product | phosphatidate cytidylyltransferase |
|---|
| Protein accession | YP_003285378 |
|---|
| Protein GI | 262393524 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0575] CDP-diglyceride synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.157639 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGCTTTA TTGCCGCTTT AACTGCAATT ACCCTATTAG GTTTTTGGGA GTGGACTCAA
TTTACAGGAA GCAACTCTCG CTTTGCTGCC CTCGTTCCGG CAGTCATTGT TACCGGACTT
AGTTTTCTAT ATATTTCGCC TGACGCACAT AGCCTCAACC ATTTAGCAAC GCCTCATTAT
GTTGTGCTGG GCCTTGGTTT TGTTTGGTGG ATTGTTGCTA GCTTAATGGC GATTACTTAT
CCCAAAACGA CGAAATCTTG GCAAAATAAT TTTGTTTTAC GCCATGTGTT TGGTTTTCTG
ACATTAATTC CATTCCTTTG GAGTGTAGTT ATTCTTAGAG CTCATGACAT TACGGTAGAT
CCATACCACG GAGCAAAGCT CGTGTTATAC GTTTGTTTCT TGGTATGGGC TGCAGATAGC
GGTGCTTACT TTGCAGGCAA AAGCTTAGGC AAACGTAAAA TGGCGCCACA TGTCAGTCCG
AATAAAACCA TTGAAGGGCT TATTGGCGGC ATTATCACGG CATTGATCGT GGCGTGGGCA
TTTGCTGATT GGTTTGATAT TCAGTTCTCC AGTCCTGTCC ATATGGTGTT GATTACGTTG
GTTACTGTTG TTATATCAGT GCTCGGCGAT CTGGTGGAAA GTATGTTCAA GCGTGTCTCA
GGCATTAAAG ACAGCAGCAA CATTATCCCA GGACATGGCG GTGTGCTCGA TCGTATTGAC
AGCCTAACCG CAGCATTCCC AGTTTTTGCT CTTCTTTACT ACGTATTCTA A
|
|---|
| Protein sequence | MGFIAALTAI TLLGFWEWTQ FTGSNSRFAA LVPAVIVTGL SFLYISPDAH SLNHLATPHY
VVLGLGFVWW IVASLMAITY PKTTKSWQNN FVLRHVFGFL TLIPFLWSVV ILRAHDITVD
PYHGAKLVLY VCFLVWAADS GAYFAGKSLG KRKMAPHVSP NKTIEGLIGG IITALIVAWA
FADWFDIQFS SPVHMVLITL VTVVISVLGD LVESMFKRVS GIKDSSNIIP GHGGVLDRID
SLTAAFPVFA LLYYVF
|
|---|
| |