| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002742 |
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| Symbol | |
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| ID | 8556470 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 1268573 |
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| End bp | 1269343 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646405833 |
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| Product | tRNA pseudouridine synthase C |
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| Protein accession | YP_003285369 |
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| Protein GI | 262393515 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.766432 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTAGAAC AAGAAATAGC GCGATCTTCA GAACCAGTGG AACTGGAGAT CGTTTATCAG
GATGAATATT TTGTAGCGGT TAACAAGCCT GCCGGCATGC TGGTGCACCG CAGTTGGTTA
GATAAACACG AAACTCAGTT TGTCATGCAA ACTTTGCGCG ACCAAATTGG TCAGCATGTG
TTCCCATTAC ATCGTCTGGA TCGTCCAACA TCTGGTGTGC TCGTGTTTGC GTTGTCGAGT
GAAGTCGCGT CACAAGTCAT GCCGATGTTT GCTGAACATA AAATGGAAAA GACGTACCAC
GCGATAGTAC GTGGTTGGAT TGAGGAAGAG GGCGTCTTGG ATTACGCACT TAAAGTCGAG
TTAGACAAGA TTGCGGATAA GTTTGCTTCA CAAGAAAAAG AAGCGCAAGA AGCGGTGACG
GAATATAAAC CGTTGGCTAA AGTGGAAGTT CCCTATTCGA CGGGTAAATT TCCTACAACG
CGTTATTGCT TAGTTGAGAT GAAACCTAAA ACGGGGCGTA AGCACCAACT TCGTCGTCAT
ATGGCGCATC TACGCCATCC GATCGTGGGT GATACAACGC ACGGAGATGG CAAGCACAAC
AAGCTATATC GCACAGAGTT TGATTCTCAT CGTTTGCTAC TGCACGCTTC AGAGTTACGG
TTTGTCCATC CATTTACCGA TCAAGATATT GTCATGACGG CCAATCTTGA TGAGACTTGG
CAGCAATTGT TTACTCGATT TGAGTGGGAT GAATCGATGA TCAACCGATA A
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| Protein sequence | MLEQEIARSS EPVELEIVYQ DEYFVAVNKP AGMLVHRSWL DKHETQFVMQ TLRDQIGQHV
FPLHRLDRPT SGVLVFALSS EVASQVMPMF AEHKMEKTYH AIVRGWIEEE GVLDYALKVE
LDKIADKFAS QEKEAQEAVT EYKPLAKVEV PYSTGKFPTT RYCLVEMKPK TGRKHQLRRH
MAHLRHPIVG DTTHGDGKHN KLYRTEFDSH RLLLHASELR FVHPFTDQDI VMTANLDETW
QQLFTRFEWD ESMINR
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