| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002726 |
|---|
| Symbol | |
|---|
| ID | 8556454 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | - |
|---|
| Start bp | 1255148 |
|---|
| End bp | 1255852 |
|---|
| Gene Length | 705 bp |
|---|
| Protein Length | 234 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 646405817 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003285353 |
|---|
| Protein GI | 262393499 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1720] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00104] probable methyltransferase, YaeB/AF_0241 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0430932 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCCACCA TGTATTCCAT TGAACCCATC GGCGTCATTG AGACACCGTA CAAAGAAAAG
TTTGCAGTAC CGCGCCAGCC TCGCTTAGTA CCAACAGCGA AAGCACGCGT AAAACTGTTA
GGCGCAGCGA ATAGCCCTGA AGCAGTGCGT GGGCTAGAAC AGTTCTCTCA CGTTTGGCTG
TTATTTTTGT TTGATCAAAA TCTGGAAGCA GGTTGGAAGC CAACCGTCCG TCCACCACGA
CTGGGCGGCA ATGAACGAAT AGGTGTCTTT GCCTCACGCT CGACTTTCCG CCCAAACGGA
ATCGGAATGT CAGCCGTTGA AGTAAACGGA GTCACTAAGC AAGGCGATCA AATCTATCTT
GATTTAGGCA GCGTTGATCT CGTTGATGGG ACACCGATTG TAGATATTAA GCCTTATATC
CCCTATTCGG ATTCTATTTC GGAAGCACAA GGCGGATACG CAGACCAAGA ACCAGAAAAG
TCACAAGTCA CCTTTTCTAC TCAAGCATTA GCAACGATAG AAAATCGATC CGATACTGAC
TATGTAAGAT CAGTCATTGA ACAAGTTCTG GCCCAAGATC CTCGTCCTGC ATACAAGAAA
AGCAAGCCGG ACGACAAAGA ATATGCGGTA AATTTGTTCG ACTTGAACGT AAAGTTCACA
GCAACAAGCA ACTTAATAAC GGTTACCGCT ATTGAAAGCT TTTGA
|
|---|
| Protein sequence | MSTMYSIEPI GVIETPYKEK FAVPRQPRLV PTAKARVKLL GAANSPEAVR GLEQFSHVWL
LFLFDQNLEA GWKPTVRPPR LGGNERIGVF ASRSTFRPNG IGMSAVEVNG VTKQGDQIYL
DLGSVDLVDG TPIVDIKPYI PYSDSISEAQ GGYADQEPEK SQVTFSTQAL ATIENRSDTD
YVRSVIEQVL AQDPRPAYKK SKPDDKEYAV NLFDLNVKFT ATSNLITVTA IESF
|
|---|
| |