| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002717 |
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| Symbol | |
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| ID | 8556445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 1244161 |
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| End bp | 1246086 |
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| Gene Length | 1926 bp |
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| Protein Length | 641 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646405808 |
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| Product | aTP-dependent DNA helicase RecQ family |
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| Protein accession | YP_003285344 |
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| Protein GI | 262393490 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0514] Superfamily II DNA helicase |
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| TIGRFAM ID | [TIGR00614] ATP-dependent DNA helicase, RecQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAAGTG ACTCGCTGCA TCAAACACTT CAATCCGTAT TTGGTTTTGA CTCATTACGC
CAAGGTCAAC AACCCGTTAT TGAAGCGGTT ATGAATGGTT ACTCTGCTGC GGCCATCTTT
CCTACAGGTT CGGGTAAGTC TCTCTGTTAC CAATTGCCAG CAACCGTATT GCCCAATCTT
ACGTTGGTGA TCTCGCCGTT GTTGGCGCTA ATGAAAGATC AGCTGAACTT TTTGCAAAGT
AAAGGGATCC CGGCCGCTTC TATCGATAGC AGTCAAAGCA GAGAAGAGTC ACAACGCGTC
ATGGCAGGGG TAAAAAATGG ACAGATCAAA ATATTGATGA TTTCTGTTGA GCGCCTAAAA
AACGAGCGTT TTCGTGAGTT CATTCGCCAA GTACCGATCT CTTTGATGGT GGTTGATGAA
GCGCACTGTA TTTCCGAATG GGGACATAAC TTCCGCCCTG ATTATCTCAA GCTACCGCAA
TATCAACGTG AACTGAACAT TCCACAATCT TTGCTTCTCA CTGCAACAGC AACGCCCGCA
GTTATTGAAG ACATGAAACA AAAGTTCGAT ATTGCCAGTG AACATATTAC CGTTACAGGC
TTCTACCGCC CCAATCTGGA TATCTCGGTG ATCCCATGCG AGGAAGCAAC GAAACAAGAA
GTGCTAAGTG AGCTCATCGC CTCTTCTCCT AAGCTTCCGA CTATCGTATA CGTGACACAA
CAGCAGACAG CAGAGCAAGT AGCAAAATCA CTAATCCATA TTGGCATTAA TGCTCACGCG
TACCATGCAG GTATGAAAAG CGACATCCGT GAACAAATCC AACAGCAGTT TATGGATAGC
CAAATTGACT GTATTGTTGC CACGATTGCA TTTGGTATGG GGGTCGATAA ATCTGATATC
CGCCGCGTCA TTCACTTCGA CTTACCCAAA TCGATCGAGA ACTACGCACA AGAGATTGGA
CGTGCAGGCA GGGACGGGCA ACGTTCTGAG TGCATTCTGC TGGGCAATAC GTCCGGCTTA
ACGGTGTTGG AAAACTTTGT CTATGGTGAC ACACCTGAAC TAACCTCGAT TAACTATGTA
GTCGAGCAAG CGAAAGAACA TGCTCCACAA TGGGAGGTAG TGCCACTGCG TTTATCGCGT
GAAAGTAATA TCCGCCAATT GCCACTCAAA ACCTTGTTGG TTTATTTGGA GCTACATAAA
CTCATTGAAG CAAAATACAG TTACTTTGCG GAATATCGCT TTAAGTTTTT GCACGATCAG
CAATTTATTG TGAATCAATT TCAAGGCGAG CGACGTCAAT TCGTGGAGGC TATTTTCTCC
TGCTCGCAAA AAGCCAAAGT GTGGTGCCAA GTTGACCTAG AAGCGTTATG GATGAACTAT
CAATCGGAAC GCAGCCGAGT TGTCGCAGCC CTCGACTATT TTCACCAGAA TGGTTGGATA
GAGCTAGAGA GCAAACAACT GACCGACGTA TACTCTGTTT TGCCAACCAC ACAGAGTTCT
GATGTTTTAA TCCAACAACT GTATGAACTG TTCCAATCCA AAGAAAGCAA AGATATCGAA
AGAATTCACA CTATGCTGCG CTTGTTCCAG TCAGAGCACT GTTTGAGCTC ACAATTGGCG
AACTACTTTG CGGATCACAA TGCACCAGAG CAATGTGGTC ACTGCTCCGT GTGTCGTGGT
CAAGTCGCTT CGTTCCCAAC ACCACAAGGT GAGGATATTG AGCCACCTCA AGTAGCAATG
TGGGTGCAGG AATTTATTCA GCTCTCCCCT TCAGCTATCA GCAATGATGC TGTCGCCCGC
TTCTTGTGCG GAATTAGTAC CCCTTTAATT AGCCAGCTAA AAGCTTCAAA ACTGGCGGGT
TATGGTGCGA TGGCCAACAC AAGCTTTGAA CAAGTATTAG CTCAGGTAGA AGCAGTAAGA
GCCTAG
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| Protein sequence | MQSDSLHQTL QSVFGFDSLR QGQQPVIEAV MNGYSAAAIF PTGSGKSLCY QLPATVLPNL
TLVISPLLAL MKDQLNFLQS KGIPAASIDS SQSREESQRV MAGVKNGQIK ILMISVERLK
NERFREFIRQ VPISLMVVDE AHCISEWGHN FRPDYLKLPQ YQRELNIPQS LLLTATATPA
VIEDMKQKFD IASEHITVTG FYRPNLDISV IPCEEATKQE VLSELIASSP KLPTIVYVTQ
QQTAEQVAKS LIHIGINAHA YHAGMKSDIR EQIQQQFMDS QIDCIVATIA FGMGVDKSDI
RRVIHFDLPK SIENYAQEIG RAGRDGQRSE CILLGNTSGL TVLENFVYGD TPELTSINYV
VEQAKEHAPQ WEVVPLRLSR ESNIRQLPLK TLLVYLELHK LIEAKYSYFA EYRFKFLHDQ
QFIVNQFQGE RRQFVEAIFS CSQKAKVWCQ VDLEALWMNY QSERSRVVAA LDYFHQNGWI
ELESKQLTDV YSVLPTTQSS DVLIQQLYEL FQSKESKDIE RIHTMLRLFQ SEHCLSSQLA
NYFADHNAPE QCGHCSVCRG QVASFPTPQG EDIEPPQVAM WVQEFIQLSP SAISNDAVAR
FLCGISTPLI SQLKASKLAG YGAMANTSFE QVLAQVEAVR A
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