Gene VEA_002709 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_002709 
Symbol 
ID8556437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp1237880 
End bp1238650 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content45% 
IMG OID646405800 
ProductNa(+)-translocating NADH-quinone reductase subunit C 
Protein accessionYP_003285336 
Protein GI262393482 
COG category[C] Energy production and conversion 
COG ID[COG2869] Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrC 
TIGRFAM ID[TIGR01938] NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.114573 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAGTA ATAACGACAG CATTAAAAAG ACGCTGGGTG TTGTTATCGG GTTGAGCCTT 
GTTTGTTCAA TCATCGTATC AACAGCAGCA GTAGGTCTGC GTGATAAGCA AAAAGCTAAC
GCTGTCCTAG ATAAGCAATC AAAGATCGTT GAAGTTGCAG GCATTGACGC GAACGGTAAG
AAAGTACCAG AGCTATTTGC TGAGTACATC GAACCTCGTC TGGTAGACCT TGAAACAGGT
AACTTTACTG AGGGTAATGC ATCTACGTAC GATCAGCGTG AAGCATCAAA AGATGCAGAA
CGTTCAATCG CATTGACACC AGAAGAAGAT GTCGCTGATA TCCGTCGTCG TGCGAATACA
GCAGTGGTGT ACTTAGTAAA AGACCAAGAT GAAGTCCAAA AAGTTATCTT GCCTATGCAC
GGTAAAGGAC TATGGTCGAT GATGTATGCC TTTGTAGCCG TTGAAACTGA TGGTAACACT
GTGTCTGCTA TTACTTACTA CGAGCAAGGT GAAACTCCTG GACTTGGTGG TGAAGTAGAG
AACCCTTCAT GGCGCGATCA ATTCATTGGC AAGAAATTGT ACAATGAAGA TCATCAGCCA
GCGATTAAGG TCGTGAAAGG CGGCGCACCG CAAGGTTCTG AGCACGGTGT TGATGGTCTA
TCAGGAGCAA CGCTCACTAG TAATGGTGTT CAACACACAT TTGACTTCTG GTTAGGTGAC
AAGGGCTTTG GTCCTTTCCT AGCAAAAGTT CGTGACGGAG AACTTAACTA A
 
Protein sequence
MASNNDSIKK TLGVVIGLSL VCSIIVSTAA VGLRDKQKAN AVLDKQSKIV EVAGIDANGK 
KVPELFAEYI EPRLVDLETG NFTEGNASTY DQREASKDAE RSIALTPEED VADIRRRANT
AVVYLVKDQD EVQKVILPMH GKGLWSMMYA FVAVETDGNT VSAITYYEQG ETPGLGGEVE
NPSWRDQFIG KKLYNEDHQP AIKVVKGGAP QGSEHGVDGL SGATLTSNGV QHTFDFWLGD
KGFGPFLAKV RDGELN