| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002705 |
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| Symbol | |
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| ID | 8556433 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 1233120 |
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| End bp | 1234274 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 646405796 |
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| Product | ribosomal RNA small subunit methyltransferase C |
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| Protein accession | YP_003285332 |
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| Protein GI | 262393478 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2813] 16S RNA G1207 methylase RsmC |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.588026 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACCG AACTGAATCT TCACGAGCGA AGCTTAACAC TTCATCGTTT CCCAAAACGC
AGCAATGAAA CTCTACAAGC GTGGGATGCC GGTGATGAGT ATCTTATTAA TCATGTTGAA
GAACTTGCTT TGCCAGACAA TCAAAACATC CTCGTGATTA ATGACAGCTT TGGTGCCCTC
TCCTGCTGGT TTTCAGAAAA GCACCATGTA ACGCTAATGA GTGATTCATT CATTTCTCAT
AAGGGTGTGC TGCAGAACCT TGAGCAAAAC CAGTGCAATA AGGTAGCATT TGCAACCACG
ATGGACCCCG TACCTTCCAA TACTGATCTC GTATTGCTGC AACTGCCAAA AAGTAACCGT
CACCTCGTTT GGATACTCAG TCAGTTAAGA AAAGCACTGC CTGCATCCTG CCCCGTCATT
GCAGTTAATA AAGCGAAAGA CATTCATACT TCAACGCTAA AACTGTTTGA AAAATATTTG
GGTGAGACAA AAACATCTCT GGCCTGGAAA AAGCACCGAT TGGTATTTGC TCAAGCAACG
GTTGAACCAA CAATTGAAGT GAGCCCTTTC ACTACTTGGC GCGTTGATGG CGAAGATATC
GAACTCAAGA ACATGCCAAA TGTCTATTCA GGAGAAAGCT TAGATTTAGG TGCGCGTTTT
ATGCTGCAGC ACCTACCTCA AGACCCATTG GTAGATAATG TTATCGATCT CGGTTGCGGT
AATGGTGTTT TGTCTGTGAA GTTTGGTCAG CTGAATCCGA ATGCTCGATT AACATGTGTT
GATGAAAGCT TTATGGCGCT TGAGTCCGCG AAGCAGAACC TGCTAGATAA CCTTGGTGAA
GATAGAGACA TACAGTGTGT TGCAAACAAT TGTTTGGACG GTTTTAAACA CAACAGCTGC
TCTATGATTA TGTGTAACCC ACCCTTTCAC CAACAGCAGG CAATCACCGA TCATATTGCT
TGGCAAATGT TCTGTGATGC AAAGCAAGTA TTGAGTGAAG GTGGTAAGTT ACTGGTGATT
GGAAATCGTC ATCTTGGTTA CGACGCAAAA CTAAAACGGC TGTTTGGCGA TAAGAATGTG
AAACTTATCG CTTCCAACAA TAAGTTTGTG ATTTTACAGG CCACAAAAAA TCCTGCTAAA
TTAAGCGCAA AATAA
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| Protein sequence | MKTELNLHER SLTLHRFPKR SNETLQAWDA GDEYLINHVE ELALPDNQNI LVINDSFGAL
SCWFSEKHHV TLMSDSFISH KGVLQNLEQN QCNKVAFATT MDPVPSNTDL VLLQLPKSNR
HLVWILSQLR KALPASCPVI AVNKAKDIHT STLKLFEKYL GETKTSLAWK KHRLVFAQAT
VEPTIEVSPF TTWRVDGEDI ELKNMPNVYS GESLDLGARF MLQHLPQDPL VDNVIDLGCG
NGVLSVKFGQ LNPNARLTCV DESFMALESA KQNLLDNLGE DRDIQCVANN CLDGFKHNSC
SMIMCNPPFH QQQAITDHIA WQMFCDAKQV LSEGGKLLVI GNRHLGYDAK LKRLFGDKNV
KLIASNNKFV ILQATKNPAK LSAK
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