| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002704 |
|---|
| Symbol | |
|---|
| ID | 8556432 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | - |
|---|
| Start bp | 1232518 |
|---|
| End bp | 1233087 |
|---|
| Gene Length | 570 bp |
|---|
| Protein Length | 189 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 646405795 |
|---|
| Product | putative lipoprotein |
|---|
| Protein accession | YP_003285331 |
|---|
| Protein GI | 262393477 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3056] Uncharacterized lipoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.939405 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAAAAT TGGTACTTGC GGCTTCGGTT GCGTTGCTTG CTGCGTGTTC AGCGCCTCAA
CAGCCTCAGC TGAATTTGAT GCCAGAAAGC ACACTGAGCA CCAATCCAAT TGTTCAAGGC
AAGACTTACA GCTTGACCAG CAAAGATGTA CGTGCAGCGC AGTACGTGGC GTTGGTGGAT
AACGGCCGTT CGAACATTCT TCCTCTTCAT GCTAAACAGA ATTTACGTAT TGCGTTAGAA
GAAGCATTAG AGAAGCAGTT TTCATCTCAA GGCTTCCATG CCGATCTAAA CAGCAACAAT
GCAATTGAAT TAAACGTTCA AGAAGCATTA GTTAACGTAA AACATTCGGT GATGGAAAAT
GAGATGGATG CGAAAGTCGT GCTTGAAATC ACCGCAGAAA CACCAGAAGG CAAACTGGTC
AAAACTTACA CAGGCACTGC GAAGCGTTCT GGCACATTGA GTGCGTCTGA TGCCGACATT
GAGCAAACAC TGAATGATGT AGTGACATTA ACACTTAAAG AAATTGCCAA TGATCCAGAG
CTTCGTCAAT ACATGCAGGA GCGTTTCTAA
|
|---|
| Protein sequence | MRKLVLAASV ALLAACSAPQ QPQLNLMPES TLSTNPIVQG KTYSLTSKDV RAAQYVALVD
NGRSNILPLH AKQNLRIALE EALEKQFSSQ GFHADLNSNN AIELNVQEAL VNVKHSVMEN
EMDAKVVLEI TAETPEGKLV KTYTGTAKRS GTLSASDADI EQTLNDVVTL TLKEIANDPE
LRQYMQERF
|
|---|
| |