| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002686 |
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| Symbol | |
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| ID | 8556414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 1214579 |
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| End bp | 1216726 |
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| Gene Length | 2148 bp |
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| Protein Length | 715 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646405777 |
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| Product | exodeoxyribonuclease V alpha chain |
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| Protein accession | YP_003285313 |
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| Protein GI | 262393459 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR01447] exodeoxyribonuclease V, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGACAA ATCACAATCT TCATTCTGAC CAAGATAGCC TATTGGTAGT GTTGGAACGC
TTGGCGCACA AAGGCGCGCT TCGTCAGCTC GACTACCAAT TCGCCTGCTT TATTGATTCT
CAAACTAATG ATGAACAGCC TGACAACCAA GCATTGGCGT TTATCGCGGG TGTTGTCAGT
AGTGAGCTTG GCAAAGGACA TATCTGTCTG TCTCTGTTCG ATGCACAAGG GCAATCTACG
GATTTAGCCA GTAAGCTAGG GCTGTTTGGT GAGTCGGCAT TGGCGCTCAA CACACAGTTG
CAAGGCATAG ACTGGATTGA AGTATTACAA AATTCCAGCG TGGTCGGCGC GCAAGGAGAA
GCCTTGCCTT TAATGTTCGA TGGTGAGCGT CTGTATCTGC ACCGCTATTG GCATTATGAA
GTGACACTGG CGGAAAAGCT CAATCAGTTG GGCGCCGCAG TTAACTTGCA ACCACAAGAG
TTTGTGCGAT TATCCGAGTT GCTCAACCAT CTGTTTGCGC GCCAATACCA TTTTCTATTT
AACGCGTTAG GCAAAGCAGT AGAAGCGGGA AGCAGCAATC AAGTGTTGCG TCAGCAATTG
GTGTGTGACC ACCTTGATGT GGTCGCAAGC GAATCGTTGG ATTGGCACGC CATTGATTCC
GTGCTTAGCA ATGCGCGCAA GGTTCAGGAT TTGCAAACAC TGGATGAACT CGTACCACTC
TCAGCTTGTG TGAACTGGCA AAAAGTCGCG GCGGCGGTTG CGTTAACTCG TCGATTTGCT
GTGATTTCTG GTGGTCCTGG TACGGGTAAA ACGACGACAG TAACCAAATT GCTTGCTGCT
TTGATTGAAC AGGCGACGCA CGAGAAAAAT CTAACCATCA AGCTGGTGGC CCCGACGGGG
AAAGCGGCGG CGCGATTAAC CGAGTCCATT GGTAAAGCAG TGCAAGAACT GCCAGTTTCT
CCGGAGCTAA AAGCCAAAAT TCCGACTGAA TCGAGCACCT TGCATCGATT ACTTGGCGCG
ATTCCTAATA GCGCAGAATT TCGTCACAAC AAGCAAAATC CACTGCATTT GGATATTTTA
GTTATCGACG AAGCGTCGAT GGTCGATTTA CCGATGATGT ACAAAGTGGT CGATGCCTTA
CCGAAACATG CGCGGCTGAT TTTGTTAGGT GATAAAGACC AACTTGCCTC AGTTGAAGCA
GGGGCAGTGT TGGGTGATAT CTGTTCGTTC CATGCATTGG GTTATGGCAA AGAGCAGGCG
TCAGCCATCG CAAAACTGAC GGGGTTCGAT ACTTTAGCCC ATACGGGTAA CAGTGCATCT
AGCATTGCTG ATAGTTTATG TATGCTGCAA AAGAGCTACC GATTTGACGC TCGCTCAGGC
ATTGGTCAGT TGGCAAAAGC GGTTAATTCC GGTTCTGCTG CGAGCGTAGA TAACGTCTGG
GCGCGTGACT TTTCTGACAT CGAACATTTC GCGCTAAGTA GTCAGCATTA CAACCAAATG
ATGCAGACGT TGGTGCAGGA ATACGGTCGT TACCTCAAAC GAATTGGACA ACAGGAAACT
GATCCTAAAA CCGGAGAGCC AGAGTCGCTA ACGCACAAAG CCAAAGCGGT GTTAGATACC
TTCAACCAAT GCCGACTGCT GTGCGCGATC CGTGAAGGTG ACTTCGGTGT GGCTGGGCTA
AACCAACGCA TCGAGAAAGC GCTCGCGGCG CGCAAGTTAA TTCAGGTTCA GGATGAAATT
TGGTATCACG GCAGACCCGT CATGGTTACG CGTAATGATC ACGGTTTAGG TTTGTATAAC
GGTGATATTG GTATTTGTAT GCGAGATGAC AGTGAAGAAG AACCGCGTTT GAAAGTCTTT
TTCGAGTTAC CTGACGGCAG TGTGAAATCG GTCTTGCCAA GCCGAGTGCC TGAACATGAA
ACGGCTTACG CCATGACCAT CCATAAATCG CAAGGCAGTG AATTTGATTA CACCCTGATG
ATTTTGCCAC CAGACTTTAG CCCGATATTA ACTCGTGAGT TGATTTACAC AGGCATTACC
CGCGCGAAAA AGCGTTTAGC TCTTTACGCC GAACTCAATG TTCTGAAGCG AGGTATTAAA
GTGAAAACCA CTCGTGCGAG TGGATTAGTA CAGCGGCTTA CTAACTAA
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| Protein sequence | MTTNHNLHSD QDSLLVVLER LAHKGALRQL DYQFACFIDS QTNDEQPDNQ ALAFIAGVVS
SELGKGHICL SLFDAQGQST DLASKLGLFG ESALALNTQL QGIDWIEVLQ NSSVVGAQGE
ALPLMFDGER LYLHRYWHYE VTLAEKLNQL GAAVNLQPQE FVRLSELLNH LFARQYHFLF
NALGKAVEAG SSNQVLRQQL VCDHLDVVAS ESLDWHAIDS VLSNARKVQD LQTLDELVPL
SACVNWQKVA AAVALTRRFA VISGGPGTGK TTTVTKLLAA LIEQATHEKN LTIKLVAPTG
KAAARLTESI GKAVQELPVS PELKAKIPTE SSTLHRLLGA IPNSAEFRHN KQNPLHLDIL
VIDEASMVDL PMMYKVVDAL PKHARLILLG DKDQLASVEA GAVLGDICSF HALGYGKEQA
SAIAKLTGFD TLAHTGNSAS SIADSLCMLQ KSYRFDARSG IGQLAKAVNS GSAASVDNVW
ARDFSDIEHF ALSSQHYNQM MQTLVQEYGR YLKRIGQQET DPKTGEPESL THKAKAVLDT
FNQCRLLCAI REGDFGVAGL NQRIEKALAA RKLIQVQDEI WYHGRPVMVT RNDHGLGLYN
GDIGICMRDD SEEEPRLKVF FELPDGSVKS VLPSRVPEHE TAYAMTIHKS QGSEFDYTLM
ILPPDFSPIL TRELIYTGIT RAKKRLALYA ELNVLKRGIK VKTTRASGLV QRLTN
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