| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002685 |
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| Symbol | |
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| ID | 8556413 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 1210905 |
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| End bp | 1214579 |
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| Gene Length | 3675 bp |
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| Protein Length | 1224 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 646405776 |
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| Product | exodeoxyribonuclease V beta chain |
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| Protein accession | YP_003285312 |
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| Protein GI | 262393458 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | [TIGR00609] exodeoxyribonuclease V, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGGTG CAGAGTGTCC TCTACATACG TTAGACCGCA CAGAGCAACC TCAACCAACG
CCACTAGAAC CGATGACGTT TCCTCTGCAT GGTGCGAGGT TAATCGAGGC ATCAGCAGGT
ACAGGTAAAA CCTTCACTAT TGCAGGTTTA TATCTGCGTC TTTTGCTTGG TCATGGCAGC
GCGGAAACTC GACATCGCGT ACCGCTTACG GTCGACCAAA TTCTGGTTGT AACCTTTACC
GAAGCGGCAA CTGCGGAATT GCGCGATCGT ATCAGGGCAA GAATCCATGA TGCGCGAATC
GCGTTTGCGC GTGGACAGAG TTCCGACCCG GTGATCCAAC CTTTGCTTAA TGAGTTTGAC
GATCACAAGC AAGCCGCAGA AATTTTATTG CAGGCAGAGC GTCAGATGGA CGAGGCGGCG
GTCTACACCA TTCACGGTTT TTGCCAACGC ATGCTAACGC AAAATGCGTT TGAATCTGGC
AGCCGATTTA ATAACGAGTT TGTGACCGAT GAAAGTCACC TAAAATCGCA AGTTGTAGCC
GATTACTGGC GCCGCAACTT TTACCCGTTG CCATTTACCT TGGCTGGAGA AATTCGCCAG
CTATGGGGCT CTCCATCTGC GTTGTTGTCT GACATCAGCA ATTACTTAAC CGGTGCGCCG
TTAAGCCTTT CTGTTCCTGC AATGAAAGGC AGTTTGGCTG ATCTTCATAC TGAAAATTTG
AAAAAAATTG ATGAATTAAA AGCACAGTGG CGAGAAAGCC AAGATGACTT CTTAACGCTG
ATTTCAGATT CAGATATTAA CAAGCGCAGC TACACCAAAA AGTCTCTGCC GACGTGGTTG
GAGGCGGTAA ACGCTTGGGC GGCAACGGAA ACTACAGGTT ACGATTATCC AGACAAGCTG
GAGAAATTCG CGCAAAACGT CTTGTTGGAA AAAACACCGA AAGGCAGTGC GCCGCAGCAC
GCGGTATTTG AAGCCATTGA AACATTTCTT GCCAATCCAA TCAGCTTAAA AGCGCCACTG
CTTGCGCATG CGATTGAGCA TTGTCGTGTG ATGCTGGCCA ATGCGAAAAA TCAAAAACAG
TGGCTCTCTT TCGATGATTT GCTGACGCAA CTTTCTGCTT CTATCGATAC GGACGAAAGC
GAGCTTTTAG CGGCGCGTAT TCGTACTTTG TACCCTGTCG CAATGATTGA CGAGTTCCAA
GATACTGACC CGCTTCAATA CAGTATTTTC AGCCGTATTT ATCTGAACAA CCCGGAATGT
GGTTTGTTTA TGATCGGTGA CCCCAAGCAG GCGATTTATG GCTTTCGTGG AGCAGACATT
TTCACTTACA TCAAAGCGCG TAACCAAGTA AGTGCCCACT ACACGTTAGG AACCAACTGG
CGTTCAAGTG CCGATATGGT GCAGGCGGTA AACCAAGTAT TTGCTTTGCC AGACAGTCCA
TTTATCTATG ATTCGGATAT TCCGTTCTTA CCCGTTAAGT ACAGTCCCAA TGCCGAAAAA
CGCATTTGGA CTATGGGTGG CCAAAAGCAA CCCGCGCTGA CTTATTGGTT GCAAGAAGCG
GACGATAAAC CGCTACCAAA AGGCGAGTAT TTGACTCGAA TGGCAGAGGC GACCGCAAGC
CAAATCCAAA CTATTTTGAC GCAGGCTCAA CAGGGGCAAG CGTGTCTGGT GAATGGCGAA
AAACAGAAAG CGGTTCAAGC GGGCGATATC GCGGTGTTGG TTCGAACAGG TAGTGAAGGT
CGAATGATCA AACAAGCGCT AGCAGACCAA GGCATTGCCA GTGTGTACCT GTCTAACCGA
GACAGTGTGT TTACCAGTTC GGTGGCGCAG GATCTACAGC GTTTGCTGCA AGCGGTGCTG
ACTCCAGAAA ATGACCGTGC GCTGCGTGCA AGTCTTGCCT CTGAGCTGTT TGCCCTCGAT
GCAGCAAGTT TGGATGCGCT TAATAACGAT GAAGTGGTGT GGGAAAATGC CGTAAACGAA
TTCAAAGAAT ATCGCAAACT TTGGGTTCAG CGTGGTGTGC TGCCGATGTT ACGCGCGGTG
ATCAGCAAAC GCCATATTGC CGAGCGATTA CTAGAAGAAG GTGCGAGTTC ACAGGGTGAG
AATGGTGAGC GAGTACTTAC CGATTTAATG CACATCGGTG AACTGCTTCA ACAAGCCAGT
AATGAACTGG ATAGCGACCA CGGTCTGCTG CGTTGGCTCG CTCAGTCTAT CAGTGATGCG
GAAAACGGTT TGGGTGGCAG TGATGACCAA ATCCAACGTT TAGAATCGGA ACGTAACTTA
GTGCAGATCG TAACTATTCA CAAATCAAAA GGCTTGGAGT ATGACCTCGT ATTTCTGCCG
TTTGTGTTCA GCTATCGAGA AGCCAGTGAA GCCAAATATT ACGATGCAGC CAATGACCGC
ACGGTACTGG ATATCACTGG CAACGATGCG TCCATGAAGC AAGCGGATAA AGAGCGTTTG
GCGGAAGACT TACGCTTGAT ATACGTGGCA CTAACGCGTG CTGTGTATGC GTGTTTTATT
GGAGCCTCGC CTTTGCGCAA TGGTCGTTCG ACCAAAGAGC CAACTGGCGT ACACCGCAGT
GCGATTGGCT ATTTGATTCA GAATGGTCAA GAAGGTGGCA TTAACGATTT GCACCAAGGT
TTAACACAGC AACAAGACGA GCTTGATTGT GTCGTTGTGG CCGATCCGCC GCAGCAACTC
GAAGAGAAGT ACGTAGCGCC ACAAGAAGAA ATACACGATC TTAGCGCGAA AGAACTGCAA
AACCCTATCG ACAGAAACTG GCGCATCACC AGTTATTCTG GCTTGGTCAA GCAAGGCTCT
CATCACGCCG AGCATGATGC CACGATTGAG ATTACGGGTT TTGATATCGA CTCATCTGAA
GAACAAGACG AAGCGGATTT ACTGGAGCCA GAGCGTTCGA TTTTTACCTT TCCACGTGGT
GCGCGTCCGG GTACGTTCCT GCACAGCCTG TTTGAGGAAA TTGAGTTTAC TCAGCCAGCC
ACGACGGAAG AGAATACACA AATCATCCTT GGTTTGATGG AAAGCGAACA GCTCGATGAA
GAGTGGTTGC CCATTTTACA ACAATTGATT GATACCGTAC TCGCAACGCC GTTGGATGGT
AAGTCTTTGC TGCTGAATCA AAAAGCACCG TCGCAACGTT TGGTGGAGAT GGAATTTTTG
TTGCCGATTG AAGTGTTGTC TGCACCGGCG TTAAACCGAG TCATTCAACG TCACGATCCG
TTGTCGGCGA AAGCGGGGGA TTTAGGTTTC CAAACCGTGC AAGGCATGCT CAAAGGTTTT
ATCGACTTGG TGTTTGAACA TCAAGGTAAA TACTACGTGC TTGACTGGAA ATCGAATCAT
CTTGGCGACG ATGTAACGAG CTACCATGGT GAGGCTCTGA AATCGGCCAT GGCGGATCAC
CGCTACGATT TGCAGTATCA GATTTATGCG TTAGCACTGC ATCGTTTCCT ACGCAGCCGA
TTGGCGAATT ATCAATATGA GCAGCACTTC GGTGGCGTGT ATTACTTGTT CTTGCGCGGC
ATGGATGGGC AGAGTGACCA CGGCATTTTT GCCGCGAAAC CAACCTTAGA GTTCTTACAA
GAGATGGATC GTTTGATTGA TGGTCAAGTA CTTGAAACGC GCTCAACTCA AGCCGGGCAG
ATGGAGCTAC TTTAA
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| Protein sequence | MSGAECPLHT LDRTEQPQPT PLEPMTFPLH GARLIEASAG TGKTFTIAGL YLRLLLGHGS
AETRHRVPLT VDQILVVTFT EAATAELRDR IRARIHDARI AFARGQSSDP VIQPLLNEFD
DHKQAAEILL QAERQMDEAA VYTIHGFCQR MLTQNAFESG SRFNNEFVTD ESHLKSQVVA
DYWRRNFYPL PFTLAGEIRQ LWGSPSALLS DISNYLTGAP LSLSVPAMKG SLADLHTENL
KKIDELKAQW RESQDDFLTL ISDSDINKRS YTKKSLPTWL EAVNAWAATE TTGYDYPDKL
EKFAQNVLLE KTPKGSAPQH AVFEAIETFL ANPISLKAPL LAHAIEHCRV MLANAKNQKQ
WLSFDDLLTQ LSASIDTDES ELLAARIRTL YPVAMIDEFQ DTDPLQYSIF SRIYLNNPEC
GLFMIGDPKQ AIYGFRGADI FTYIKARNQV SAHYTLGTNW RSSADMVQAV NQVFALPDSP
FIYDSDIPFL PVKYSPNAEK RIWTMGGQKQ PALTYWLQEA DDKPLPKGEY LTRMAEATAS
QIQTILTQAQ QGQACLVNGE KQKAVQAGDI AVLVRTGSEG RMIKQALADQ GIASVYLSNR
DSVFTSSVAQ DLQRLLQAVL TPENDRALRA SLASELFALD AASLDALNND EVVWENAVNE
FKEYRKLWVQ RGVLPMLRAV ISKRHIAERL LEEGASSQGE NGERVLTDLM HIGELLQQAS
NELDSDHGLL RWLAQSISDA ENGLGGSDDQ IQRLESERNL VQIVTIHKSK GLEYDLVFLP
FVFSYREASE AKYYDAANDR TVLDITGNDA SMKQADKERL AEDLRLIYVA LTRAVYACFI
GASPLRNGRS TKEPTGVHRS AIGYLIQNGQ EGGINDLHQG LTQQQDELDC VVVADPPQQL
EEKYVAPQEE IHDLSAKELQ NPIDRNWRIT SYSGLVKQGS HHAEHDATIE ITGFDIDSSE
EQDEADLLEP ERSIFTFPRG ARPGTFLHSL FEEIEFTQPA TTEENTQIIL GLMESEQLDE
EWLPILQQLI DTVLATPLDG KSLLLNQKAP SQRLVEMEFL LPIEVLSAPA LNRVIQRHDP
LSAKAGDLGF QTVQGMLKGF IDLVFEHQGK YYVLDWKSNH LGDDVTSYHG EALKSAMADH
RYDLQYQIYA LALHRFLRSR LANYQYEQHF GGVYYLFLRG MDGQSDHGIF AAKPTLEFLQ
EMDRLIDGQV LETRSTQAGQ MELL
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