Gene VEA_002684 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_002684 
Symbol 
ID8556412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp1207086 
End bp1210577 
Gene Length3492 bp 
Protein Length1163 aa 
Translation table11 
GC content48% 
IMG OID646405775 
Productexodeoxyribonuclease V gamma chain 
Protein accessionYP_003285311 
Protein GI262393457 
COG category[L] Replication, recombination and repair 
COG ID[COG1330] Exonuclease V gamma subunit 
TIGRFAM ID[TIGR01450] exodeoxyribonuclease V, gamma subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTTACTG TTTATCACTC CAACCAAGTT GACGTTCTTA AATCACTCCT TGTCGAACTG 
ATTCGAATCG GTCCGCTGGA AAACCCGTTC GAAAAAGAAC AAATTCTGGT TCAAAGTCCG
GGCATGTCCC AGTGGCTAAA AATGGAATTG GCCAAAGAGT TTGGTGTTGC CGCGAACATT
GATTTTCCGC TTCCTGCTAC CTTCATTTGG GAAATGTTTA CGCAGGTGTT GCCAGACGTG
CCAAAACGCA GTGCGTTTAA CAAAGAAGCG ATGACTTGGA AGTTGATGCA TCTGCTGCCG
GGGCTTCTCA ACCAAGACGT GTTTTCGCCG TTAGCGCAGT ACCTCAAAGA TGACAGTGAT
CACTCTAAGC TGTATCAGCT GGCTGAGAAA ATTGCCGATA TTTTCGATGG TTACTTGGTG
TATCGTCCGG AGTGGATCGC AAGTTGGGAA GCTGGGCATA GTGTGCCAGA GCTGGAAGAT
GAGCATCCGT GGCAGCCGAT CTTATGGCAA GCGTTGTATG ATCACACTGT GTCATTAGGA
CAGTCTCCAT ATCACCGTGC CAACCTTTAT GAGCACTTTA TCGACACGTT AGAGAGTTTT
AACGGCAATT TTGACCATTT ACCCAAGCGT TTGTTTGTTT TTGGCATTTC TTCGTTGCCG
CCTCGCTATA TGGATGCGCT AAAAGCAATT GGTGAACACA TCGACGTGCA TCTGATGTTC
ACCAACCCGT GTCGTTATTA CTGGGGTGAA GTTCGAGATC GCAAATATCT GGCTCGTTTG
GCGGCGAAAC ATCGTCAGCA CGTTGTGTGG CATGACGATC ACTCGGAAGT GCAAGGTGAA
ACTGAGCAAC TGAAAGGATC ACTGGAAGAT AATGTGATCG ATGAGCTGCA CACCGATGTG
GTCGGAAACA GTCTGTTGGC GTCCATGGGT AAACTCGGGC GTGACAATAT GTATCTGTTG
TCTCAGCTGG AGTCTCATGA AATTGAAGCG TTTGTTGATG TTGAGCGCGA CAGTCTGCTC
CATCAATTGC AAGCGGATAT TCTCAATCTT GAAGAACATC AAGATGACCA ACAGATTGAA
AACAGTCATC ACAAACAAGT GGTTCGCTTG GGTGATAAAT CACTCAGCCT GCACGCTTGC
CACAGCCCGA TGCGTGAAGT GGAAGTGCTG CATGATCAAC TATTGGCGAT GTTCGATGCT
GACCCAACGT TAAAACCGCG CGATATTATC GTGATGGTCG CGGACATCAA CGCTTACAGC
CCTGCGATTC AGGCGGTCTT TGGTAACGCA CCGGGTGAGC GTTTTATTCC CTATTCGATT
TCTGACCGAA CCGCCGATCA AGAGAGCCCA ATTCTGGCCG CATTTATGCA GTTGGTGAAC
TTACCCAATA CGCGCTGTTT GGCATCAGAA CTACTCGAAC TTCTGGAAAC TCCAGCGATA
TTAAAGCGTT TTGAACTCAG CGAAGATGAT TTCTTACAAG CCAAACAATG GGTTGAAGAA
TCGGGAATTC GCTGGGGGTT GGATGCCAAT ACCGGACGCG AATTTGAACT GCCGGAAACC
CGTCAAAACA CATGGCAATT TGGTATTCAA CGCATGTTGC TTGGCTACGC GATGCCAGAA
TCCGCAGGTT TGTTTGAAAC CGAGCAAGGC AGTTTGTCTC CGTACAACGA AGTGCAAGGC
ATGGGCGCAG AGCTGGCGGG CAAGTTGGCA CACTTTATCC AACAAATTAG CACTTATCGA
AGCAAACTTT CTCATGTTCA GACTATTGAT AGTTGGCGAG AGACATTAGT TTCACTGCTG
GATGACTTCT TCTCGGTTGA GTTAGAAGGT GAAATGGCGC TCAAATCCAT TCGAGATACG
CTCAGCCAAC TCAAAGAGCA ATTAGCTGAT GCCGCATTTG ATGATGCGTT ATCGCCGTCG
ATCATCAGCC AATACCTTCA AAACAAATTA TCTGGCACAC GAGTCAGCCA GCGCTTCCTG
GCTGGTCAAG TGAACTTTTG TACCCTGATG CCGATGCGAT CTATTCCGTT TAGAACCGTA
TGTCTACTGG GGATGAATGA CGGCGTGTAC CCGCGTTCTA TGCCGCCAGA AGGCTTTGAC
TTGATGACGG GAAGAACCAA GCCGGGCGAC CGTTCGCGCC GAGATGATGA CCGTTACCTA
TTCCTCGAAG CGATGTTGTC TGCACAGCAA ACGCTCTACA TCAGTTATGT TGGCCGTTCA
ATCCAAGACA ACACCGAGCG AGTGCCTTCG GTTCTGGTTT CTGAGCTGAT GGAATACTGC
CACCAAAACT ATTGTTTAAG TGGTGATGAA GCGTTGCCCG TTGATGAGTC TGGCGACAAT
TTATTAAATG CGTTGGTGAA TACCCACGCC ATGGTGCCGT TTAGCCCAAG TGCGTTCCAA
GGCACGCACG CCAGCTACGC GAAAGAGTGG ATTCCAGCGG CATTGACTCA AAGTAGTCAA
TCGCAAGGCT ATGTTCGTCG TGATTTTAAT CGGGCATTAG ACGACTATCT GTTAGGAGCG
ACGTTCCCAC TTGAGCTCGA CTTAGTCGAG TTGCAACGTT TCTGGCGCTT ACCTGTGCAG
TATTTTTTCA ATCGTCGCTT AAAAGTAATC TTTGAACCGC CACTGCCGGT GATGGAAGAC
GACGAACCCT TTGTTTTAGG TGGTTTGGAA AGTTATCAAA TGCGTGATGA GCTGTTAGAA
GCCTTGCTTG AAACGACATT GATGCAGCCA GAGAAAAAAA CAGAGGTGCT TAAACACTTT
ATGAGTCAAC AGCGTGCGCA AGGCAAACTG CCGGTGGGGG CGTTTGGTGA TATCGAATTT
GAAACCAACC GAGTTCAGGC GGAAGAGCTG GTGGATAAAC TGGCGTTTTT ATCTGGTGCG
CCTCAAGACG ATTTGGAAAT CGACCTGACG TTTGACTCCT TATTTGAGCG AAATGAAGGC
GAAGAGAAAA ACGTTCGCCT AACAGGTTGG CTAACCCAGT GTTACCAATC TGGGTTGATT
CGCTATCGAA GCGGTAAGAT TCGATCGCAG GATTACCTTG CAGCGTGGAT CGATCACCTT
GCCATGTCGG CGTCGGGTTA TGCCAAGAAA ACTCACCTGA TTGGCTACGA TCGTAAAGAA
GGCGCGCTGC ATTTGATCTA CTCAGAAATT GCCGATGCGC AGTATGCCAA ACAGCTACTG
ACTGAATTAG TTCGCTTATT CTTCGAAGGC ATGACTAAGC CTTTGCCTTA TTTCCCGAAA
ACGGCGTTGG CTTGTGTTGA AGCGGGCTTT AGCCGCGGTC AGTGGGTCGA TGACGAAGAG
AAATCTTTGA AGAAAATGGC TGACGCATTC AATGATGGCT TCATGAGCCC GGGTGAAGGC
AATAATGCGT ACATCTCTCG AATTTGGCCT GCTTGGAATG ATGAGTTGGC CTCAGAAGTT
CGTTTGCTGA CAGCATTAGT TTTGCAAGGT GCGCGCTTAG CGGTTCAAGA CGCTGATGAC
GTAAAAGCGT AA
 
Protein sequence
MFTVYHSNQV DVLKSLLVEL IRIGPLENPF EKEQILVQSP GMSQWLKMEL AKEFGVAANI 
DFPLPATFIW EMFTQVLPDV PKRSAFNKEA MTWKLMHLLP GLLNQDVFSP LAQYLKDDSD
HSKLYQLAEK IADIFDGYLV YRPEWIASWE AGHSVPELED EHPWQPILWQ ALYDHTVSLG
QSPYHRANLY EHFIDTLESF NGNFDHLPKR LFVFGISSLP PRYMDALKAI GEHIDVHLMF
TNPCRYYWGE VRDRKYLARL AAKHRQHVVW HDDHSEVQGE TEQLKGSLED NVIDELHTDV
VGNSLLASMG KLGRDNMYLL SQLESHEIEA FVDVERDSLL HQLQADILNL EEHQDDQQIE
NSHHKQVVRL GDKSLSLHAC HSPMREVEVL HDQLLAMFDA DPTLKPRDII VMVADINAYS
PAIQAVFGNA PGERFIPYSI SDRTADQESP ILAAFMQLVN LPNTRCLASE LLELLETPAI
LKRFELSEDD FLQAKQWVEE SGIRWGLDAN TGREFELPET RQNTWQFGIQ RMLLGYAMPE
SAGLFETEQG SLSPYNEVQG MGAELAGKLA HFIQQISTYR SKLSHVQTID SWRETLVSLL
DDFFSVELEG EMALKSIRDT LSQLKEQLAD AAFDDALSPS IISQYLQNKL SGTRVSQRFL
AGQVNFCTLM PMRSIPFRTV CLLGMNDGVY PRSMPPEGFD LMTGRTKPGD RSRRDDDRYL
FLEAMLSAQQ TLYISYVGRS IQDNTERVPS VLVSELMEYC HQNYCLSGDE ALPVDESGDN
LLNALVNTHA MVPFSPSAFQ GTHASYAKEW IPAALTQSSQ SQGYVRRDFN RALDDYLLGA
TFPLELDLVE LQRFWRLPVQ YFFNRRLKVI FEPPLPVMED DEPFVLGGLE SYQMRDELLE
ALLETTLMQP EKKTEVLKHF MSQQRAQGKL PVGAFGDIEF ETNRVQAEEL VDKLAFLSGA
PQDDLEIDLT FDSLFERNEG EEKNVRLTGW LTQCYQSGLI RYRSGKIRSQ DYLAAWIDHL
AMSASGYAKK THLIGYDRKE GALHLIYSEI ADAQYAKQLL TELVRLFFEG MTKPLPYFPK
TALACVEAGF SRGQWVDDEE KSLKKMADAF NDGFMSPGEG NNAYISRIWP AWNDELASEV
RLLTALVLQG ARLAVQDADD VKA