| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002681 |
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| Symbol | |
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| ID | 8556409 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 1202924 |
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| End bp | 1203850 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646405772 |
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| Product | transcriptional regulator LysR family |
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| Protein accession | YP_003285308 |
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| Protein GI | 262393454 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000951441 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAGTC ACATTTCTCT TAAACAACTG AAAGTGTTTA CGACGATCAC GCAGCACAAA
ACGCTCACAG CAGCTTCTGA TAGTCTCTTT TTATCGAAAG CCGCAGTGAG CATGGCACTC
TCAGAATTAG AAAAACAGAT CGGCCATCAC TTGTTTGATC GTGTTAATAA CCGGCTGATT
TTGAACCAAG AAGGTCAAAA ACTGCTGCCA CTGGCGGATG AGTTACTCAA CCGAGCCAAA
GACATCGAGA GCATTTTCGA TGGTGACCAA GCGGTATCGG GCCAACTTCG CATTGGTGCC
AGCGACACCA TTGGTAACCA AGTCGCACCC TATTTGCTTA GCGAATTTCG TCAGCAAACG
AACCATCGTT CTCAAAGTCT GTTCATTTCT AACTCTGCAC AAATCTGCGA CATGCTGACC
GATTACGAGT TAGACATCGC CCTCATTGAA GGCAAAACAC TTCACCCTGA ATTGCAGTCT
ACCCAGTTTA GCGAAGATGA AATGTGCGTG ATTTGCGCGC CCGATTACCC AGCCGCGCAC
GAAGGGCCAA TAAACTTAAC CGAGCTAGAA AACAGCGAAT GGATATTGCG AGAGGCAGGA
TCTGGTTCAC GCGAATTTTT TATGCGCGTT GTCGCGCCGC GCTTGGAACA TTGGCATGAA
GCTTTTCAGC TCAATACCAC CGAAGCGTTG ATCAACTCAG TATCGGCGGG GTTAGGCTTG
GGCTGCTTGT CACGCTTGTC TGCTGAACCT GCTATTCGTG ACGGTCGCGT GCAACTGCTC
GACATGCCTT TGGATATGAA ACGTCGCTTC TGGCTACTGG TTCACAAAGA GAAATACCAA
AGCCCACTAC TCAGAACGTT TATCGAATTT TGCCAAGATT GGGAACGACC AAATAACCTT
TATCTAGAGA ATACGCCCTC CAAGTAA
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| Protein sequence | MASHISLKQL KVFTTITQHK TLTAASDSLF LSKAAVSMAL SELEKQIGHH LFDRVNNRLI
LNQEGQKLLP LADELLNRAK DIESIFDGDQ AVSGQLRIGA SDTIGNQVAP YLLSEFRQQT
NHRSQSLFIS NSAQICDMLT DYELDIALIE GKTLHPELQS TQFSEDEMCV ICAPDYPAAH
EGPINLTELE NSEWILREAG SGSREFFMRV VAPRLEHWHE AFQLNTTEAL INSVSAGLGL
GCLSRLSAEP AIRDGRVQLL DMPLDMKRRF WLLVHKEKYQ SPLLRTFIEF CQDWERPNNL
YLENTPSK
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