Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_002651 |
Symbol | |
ID | 8556379 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | + |
Start bp | 1166300 |
End bp | 1167241 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 646405742 |
Product | type II/IV secretion system protein TadC associated with Flp pilus assembly |
Protein accession | YP_003285278 |
Protein GI | 262393424 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2064] Flp pilus assembly protein TadC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAGCA TTCAAGGATG GTTAAACGGT TTTGCTGTCG GCCAAGAGAC GTTACTCATG GGGTTGATCC TCATCACCAC CGTGTTAGTG GTGATGACGC TGGGCTCGGT AATTATCGGG GTTAACTCGC CAATTAAAAG AAAGTTAGCC GAACTGTCTG GTGATAAAAA AGAAGTCTCT CACCACAACA AAAAAATGGC TGACACATTG GAGTCGTTAG CGCCTTTAAC TTCGCCAACC AGTGAAAAAG AGCGCCAAAC GACACGCAAT AAACTGATGC ATGCTGGGTT TCATGAAAGC AATGCATTGT CGATGTTCTA TGCCATTAAA TCGGTCACAA CAATACTAGG TGTGATGGTG GCGGCACTGG TGTATTTCTC GATTCCGGAA TCTAAATATC TGTACACCTA CATGGCGTTA TCCGTATTTA TTGGGCTTCT GATTCCTGAT TTTATTTTGC GCCGAATGGT CAACAAGCGT CAGCAAGCGA TTCGTGCAGG TGTGCCTGAC ATGCTCGATT TGCTGGTGGT TTGTACCGAG TCAGGGCTTG GCTTTAATGC GGCTTTGCGT CGCGTTGCAG ATGAGTTGGT TATCTCGCAC CCAGAGCTTG CCGATGAAAT AGACACGGTG TGCAATAAAA TTAAAGCGGG TAAACCAATG CCTGAAGCCT TAAGAGAGCT AGTATTAAGG ACAGGGTTAG AAGAATTGAT GGGGCTGGTG AGCATGCTTA GTCACGCCTC TCGAATAGGT GGGAGCTTAG TCAACTCCTT GCGTGAGTAT ACCGAAGACT ATAGGGATAA GCGTCAACAA GCAGCAGAAG AAATTGCTGC AAAAATCCCA GTCAAAATGA TGTTTCCAAT GGTGCTGTTT ATTTGGCCAT GTTTTTTCAT CGTGGCTATT GGACCTGCGT TAATTTCATT GGCTGAGGCA TTTTCTAATT AA
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Protein sequence | MESIQGWLNG FAVGQETLLM GLILITTVLV VMTLGSVIIG VNSPIKRKLA ELSGDKKEVS HHNKKMADTL ESLAPLTSPT SEKERQTTRN KLMHAGFHES NALSMFYAIK SVTTILGVMV AALVYFSIPE SKYLYTYMAL SVFIGLLIPD FILRRMVNKR QQAIRAGVPD MLDLLVVCTE SGLGFNAALR RVADELVISH PELADEIDTV CNKIKAGKPM PEALRELVLR TGLEELMGLV SMLSHASRIG GSLVNSLREY TEDYRDKRQQ AAEEIAAKIP VKMMFPMVLF IWPCFFIVAI GPALISLAEA FSN
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