Gene VEA_002651 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVEA_002651 
Symbol 
ID8556379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVibrio sp. Ex25 
KingdomBacteria 
Replicon accessionNC_013456 
Strand
Start bp1166300 
End bp1167241 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content45% 
IMG OID646405742 
Producttype II/IV secretion system protein TadC associated with Flp pilus assembly 
Protein accessionYP_003285278 
Protein GI262393424 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2064] Flp pilus assembly protein TadC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAGCA TTCAAGGATG GTTAAACGGT TTTGCTGTCG GCCAAGAGAC GTTACTCATG 
GGGTTGATCC TCATCACCAC CGTGTTAGTG GTGATGACGC TGGGCTCGGT AATTATCGGG
GTTAACTCGC CAATTAAAAG AAAGTTAGCC GAACTGTCTG GTGATAAAAA AGAAGTCTCT
CACCACAACA AAAAAATGGC TGACACATTG GAGTCGTTAG CGCCTTTAAC TTCGCCAACC
AGTGAAAAAG AGCGCCAAAC GACACGCAAT AAACTGATGC ATGCTGGGTT TCATGAAAGC
AATGCATTGT CGATGTTCTA TGCCATTAAA TCGGTCACAA CAATACTAGG TGTGATGGTG
GCGGCACTGG TGTATTTCTC GATTCCGGAA TCTAAATATC TGTACACCTA CATGGCGTTA
TCCGTATTTA TTGGGCTTCT GATTCCTGAT TTTATTTTGC GCCGAATGGT CAACAAGCGT
CAGCAAGCGA TTCGTGCAGG TGTGCCTGAC ATGCTCGATT TGCTGGTGGT TTGTACCGAG
TCAGGGCTTG GCTTTAATGC GGCTTTGCGT CGCGTTGCAG ATGAGTTGGT TATCTCGCAC
CCAGAGCTTG CCGATGAAAT AGACACGGTG TGCAATAAAA TTAAAGCGGG TAAACCAATG
CCTGAAGCCT TAAGAGAGCT AGTATTAAGG ACAGGGTTAG AAGAATTGAT GGGGCTGGTG
AGCATGCTTA GTCACGCCTC TCGAATAGGT GGGAGCTTAG TCAACTCCTT GCGTGAGTAT
ACCGAAGACT ATAGGGATAA GCGTCAACAA GCAGCAGAAG AAATTGCTGC AAAAATCCCA
GTCAAAATGA TGTTTCCAAT GGTGCTGTTT ATTTGGCCAT GTTTTTTCAT CGTGGCTATT
GGACCTGCGT TAATTTCATT GGCTGAGGCA TTTTCTAATT AA
 
Protein sequence
MESIQGWLNG FAVGQETLLM GLILITTVLV VMTLGSVIIG VNSPIKRKLA ELSGDKKEVS 
HHNKKMADTL ESLAPLTSPT SEKERQTTRN KLMHAGFHES NALSMFYAIK SVTTILGVMV
AALVYFSIPE SKYLYTYMAL SVFIGLLIPD FILRRMVNKR QQAIRAGVPD MLDLLVVCTE
SGLGFNAALR RVADELVISH PELADEIDTV CNKIKAGKPM PEALRELVLR TGLEELMGLV
SMLSHASRIG GSLVNSLREY TEDYRDKRQQ AAEEIAAKIP VKMMFPMVLF IWPCFFIVAI
GPALISLAEA FSN