| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002643 |
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| Symbol | |
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| ID | 8556371 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 1157901 |
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| End bp | 1158656 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646405734 |
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| Product | flp pilus assembly protein RcpC/CpaB |
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| Protein accession | YP_003285270 |
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| Protein GI | 262393416 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3745] Flp pilus assembly protein CpaB |
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| TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTCGGA CTCAAGTCAT CATGTTGCTG TTGCTCTCCA TTGTTTTCGG CCTTGCCGCC
GTTTTGATCG CTAAACAATG GATGGATGGC AGAAACCAAC CAACTGTCGA GTTAGAAGAG
GTCGAAAGAC ACCCAGTTTT AGTTGCCGCC ATGGAACTAG AGCCAGGAAC GATTCTATCT
GAGAAACATT TGTCTACTAA GCTCATGGAA GTGGATTGGA TAGACGATGA AACGCTAAAA
GTACAAGAAC AGGCATTGGG AAGAATTGTT GCCAATACCA TTTATGCGGG CGAGCTGGTT
AATTCGAATC GTCTTGCATT GCCCGGTGAG GGCGCGACAC TTGCTGCTTT AATTCCTGAA
AACAAACGAG CAATCACCAT TCGTGTTAAT GACGTTATCG GTGTGGCCGG GTTCTTGTTG
CCGGGCAATA AGGTCGATGT ATTGAATACC GTGAGTTATG GACAAGGTAA AAACGCCACA
ACAAAAACGG TGCTTAAAAA CATCAACGTT CTTGCGGTCG ACCAAACAGC CAAAACCAAT
GATAACAAAC CCGTTATTGT GCGTGCGGTG ACTTTAGAAG TAACACCGAA AGAGGCAGAA
AAGCTCCTAT CGGCGAACAG CAAAGGCGAC ATTCAACTTG CTCTACGCAA CCCTCATGAA
GTGGATAAAC CTGTTGTAGC AAGAAAATAC ACGCCACGAC CTAGTGTGAC CATTATTAAG
GGATCTCAGG CATCCAGTGT CCGAGTCAGC AATTAG
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| Protein sequence | MSRTQVIMLL LLSIVFGLAA VLIAKQWMDG RNQPTVELEE VERHPVLVAA MELEPGTILS
EKHLSTKLME VDWIDDETLK VQEQALGRIV ANTIYAGELV NSNRLALPGE GATLAALIPE
NKRAITIRVN DVIGVAGFLL PGNKVDVLNT VSYGQGKNAT TKTVLKNINV LAVDQTAKTN
DNKPVIVRAV TLEVTPKEAE KLLSANSKGD IQLALRNPHE VDKPVVARKY TPRPSVTIIK
GSQASSVRVS N
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