Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_002636 |
Symbol | |
ID | 8556364 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | + |
Start bp | 1147824 |
End bp | 1149203 |
Gene Length | 1380 bp |
Protein Length | 459 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 646405727 |
Product | DNA repair protein RadA |
Protein accession | YP_003285263 |
Protein GI | 262393409 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1066] Predicted ATP-dependent serine protease |
TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00949545 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGAAAG CAAAACGAGC GTATGTTTGT AATGATTGTG GCGCGGATTT TCCCCGTTGG CAGGGGCAGT GTAACGCATG TGGTTCGTGG AATACGATAA CAGAAGTCCG TATCGCTGCA TCGCCAACGG TTGCTCGTAA TGAACGTTTA TCCGGCTACG CTGGCTCCGC AACAGAAGCA ACAGTTCAAA CGTTATCTGA AATTGATCTG CAGGAAGTGC CACGCTTCAC CAGTGGGTTT AAAGAGCTTG ACCGCGTATT AGGTGGGGGC GTTGTACCCG GCGCCGCTAT TTTGATTGGT GGTAACCCTG GTGCGGGTAA ATCCACCTTG CTGCTGCAAA CCATGTGTAG TTTGTCTGCG CAAATGCCAA CGCTCTATGT AACAGGTGAA GAATCGTTGC AGCAGGTGGC GATGCGTGCT TCTCGACTAG GGTTGCCGAA AGATCATTTA AAAATGCTAT CGGAAACGAA CGTCGACAAA ATTTGCCAAA TTGCTGAAAA AGAGCAACCT CGCATTATGG TGATTGACTC GATTCAGGTA ATGCACGTTT CAGATGTTCA ATCGTCACCG GGCAGTGTTG CTCAAGTACG TGAATCTGCG ACAGCTCTGA CACGATACGC AAAACAGAAT AACGTCGCGG TATTTATTGT TGGTCACGTA ACAAAAGATG GTACCCTTGC GGGCCCTAAA GTTCTTGAGC ACATTATAGA CTGTTCAGTG CTGCTTGATG GTGGTACTGA TAGCCGCTTT CGCACATTGC GTAGTCATAA AAACCGCTTT GGCGCTGTGA ATGAGCTCGG TGTTTTTGCA ATGACAGGCC AAGGGTTGAA AGAAGTGAGT AACCCATCCG CGATTTTCCT TTCTCGTGGT GAAGAAGAAA CATCAGGTTC TTCTGTTATG GTGGTTTGGG AAGGTACGCG TCCTCTATTA GTAGAGATTC AAGCGTTGGT GGATTACTCG CAATTGGCAA ACCCTCGCCG TGTTGCGGTC GGTTTGGAGC AGAACCGCTT ATCACTTTTG CTCGCTGTGT TGCATAAGCA TGGTGGCTTA CAAATGGCAG ACCAAGATGT CTTTGTTAAT GTGGTTGGCG GTGTTAAGGT GACGGAGACG AGTGCCGATC TTGCGTTAGT TATGGCGCTT TTATCGAGTT TTCGTGACCG TCCACTACCC AAAGATGTGG TTATTTTTGG TGAGGTCGGG CTTGCAGGCG AAATCCGTCC TGTGCCAAGT GGGCAAGAAC GTTTGAATGA AGCGTTCAAA CATGGTTTCA AGAAAGCCAT TGTGCCTGCA GCCAACATGC CGAAAGGCGG CATTCCTGGC ATGCAAATTC ACGGCGTTAA GAAATTGTCG GAAGCCATAG AGGCTTTTGA CGAGCTGTAA
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Protein sequence | MAKAKRAYVC NDCGADFPRW QGQCNACGSW NTITEVRIAA SPTVARNERL SGYAGSATEA TVQTLSEIDL QEVPRFTSGF KELDRVLGGG VVPGAAILIG GNPGAGKSTL LLQTMCSLSA QMPTLYVTGE ESLQQVAMRA SRLGLPKDHL KMLSETNVDK ICQIAEKEQP RIMVIDSIQV MHVSDVQSSP GSVAQVRESA TALTRYAKQN NVAVFIVGHV TKDGTLAGPK VLEHIIDCSV LLDGGTDSRF RTLRSHKNRF GAVNELGVFA MTGQGLKEVS NPSAIFLSRG EEETSGSSVM VVWEGTRPLL VEIQALVDYS QLANPRRVAV GLEQNRLSLL LAVLHKHGGL QMADQDVFVN VVGGVKVTET SADLALVMAL LSSFRDRPLP KDVVIFGEVG LAGEIRPVPS GQERLNEAFK HGFKKAIVPA ANMPKGGIPG MQIHGVKKLS EAIEAFDEL
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