| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002625 |
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| Symbol | |
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| ID | 8556353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 1134438 |
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| End bp | 1136027 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 646405716 |
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| Product | peptide chain release factor 3 |
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| Protein accession | YP_003285252 |
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| Protein GI | 262393398 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG4108] Peptide chain release factor RF-3 |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00503] peptide chain release factor 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.203993 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAAATA CACCTTTTCT AAGCGAAGTG TCTAAACGTA GAACGTTCGC TATTATTTCT
CACCCGGATG CGGGTAAAAC CACCATTACT GAAAAAGTCC TTTTATTCGG AAACGCGATT
CAAAAAGCAG GTACGGTTAA AGGTCGTGGT AATGCACAGC ACGCAAAATC AGACTGGATG
GAAATGGAAA AGGAACGTGG TATCTCGGTA ACCACGTCGG TGATGCAGTT CCCTTACAAT
GATTGCCTGG TAAACCTACT TGATACTCCT GGACACGAAG ACTTCTCGGA AGATACATAT
CGTACTCTAA CGGCAGTCGA CTCGTGTTTG ATGGTTATCG ATGCTGCGAA AGGTGTCGAG
GATCGTACTC GTAAGTTGAT GGAAGTAACC CGTCTACGTG ATACGCCAAT CGTGACCTTT
ATGAACAAAC TTGACCGTGA CGTTCGTGAT CCAATGGAAG TATTGGACGA AGTAGAAAAC
GAATTGGGCA TGATGTGTGC GCCTATCACG TGGCCAATCG GCTGTGGTAA AGAGTTTAAA
GGTGTGTACC ACATTCACCG TGATGAAACG ATTTTATACG AATCTGGTCA CGGTCATGAG
ATTCAAGAAG TTCGAATCAT CAAAGGTCTA GATAACCCAG AGCTTGATGA AAAAGTCGGT
GCAGGCCTTG CGGAAAGTGT TCGAGAAGAG CTTGAGCTTG TTATGGGTGC TTGCCCTGAG
TTTGATTTGG AAATGTTCTT AACAGGTGAC CTGACGCCAG TTTACTTCGG TACCGCATTA
GGTAACTTCG GTGTAGACCA CATGCTAGAC GGTCTAACAG AGTGGGCACC AGCACCGAAA
ACGCGTCAAG CGGTTGAGCG TGAAGTTGAA GCGACAGAAG AGAAGTTCTC TGGTTTCGTA
TTCAAGATCC AAGCAAACAT GGACCCGAAA CACCGTGACC GTATCGCATT CATGCGTATT
GTATCGGGTA CTTACACGCA GGGTATGAAG ATGAACCACG TTCGTCTTGG CAAGCAGGTA
AGTATCTCTG ATGCAGTAAC CTTTATGGCT GGTGACCGTT CACGTGCAGA ACACGCTTAC
GCGGGTGATA TCATTGGTCT GCATAACCAC GGTACTATCC AGATTGGTGA TACCTTTACT
CAAGGTGAGT CACTGAAGTT CTCTGGTATT CCGAACTTTG CCCCGGAACT GTTCCGTCGT
ATTCGCCTGA AAGATCCATT AAAGCAGAAA CAGCTACTAA AAGGCTTGGT GCAACTATCA
GAAGAAGGTG CGGTACAGGT ATTCCGTCCA CTACAAAACA ACGATCTGAT CGTTGGTGCC
GTTGGTGTAC TTCAGTTCGA TGTTGTTGTG GCTCGTTTGA AGTCTGAATA TAACGTTGAA
GCGATTTATG AAGGCATTAA CGTTGCAACT GCGCGTTGGG TTGAGTGTGA TGATGCGAAG
AAACTGGATG AGTTCCAACG TAAGAACCAA GCAAACTTAG CATTGGATGG TGGTGATAAC
CTAACGTATA TTGCACCAAC AATGGTTAAC TTAAACTTGG CGAAAGAGCG TTTCCCTGAT
ATTGATTTCC GTGCGACGCG TGAGCACTAA
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| Protein sequence | MSNTPFLSEV SKRRTFAIIS HPDAGKTTIT EKVLLFGNAI QKAGTVKGRG NAQHAKSDWM
EMEKERGISV TTSVMQFPYN DCLVNLLDTP GHEDFSEDTY RTLTAVDSCL MVIDAAKGVE
DRTRKLMEVT RLRDTPIVTF MNKLDRDVRD PMEVLDEVEN ELGMMCAPIT WPIGCGKEFK
GVYHIHRDET ILYESGHGHE IQEVRIIKGL DNPELDEKVG AGLAESVREE LELVMGACPE
FDLEMFLTGD LTPVYFGTAL GNFGVDHMLD GLTEWAPAPK TRQAVEREVE ATEEKFSGFV
FKIQANMDPK HRDRIAFMRI VSGTYTQGMK MNHVRLGKQV SISDAVTFMA GDRSRAEHAY
AGDIIGLHNH GTIQIGDTFT QGESLKFSGI PNFAPELFRR IRLKDPLKQK QLLKGLVQLS
EEGAVQVFRP LQNNDLIVGA VGVLQFDVVV ARLKSEYNVE AIYEGINVAT ARWVECDDAK
KLDEFQRKNQ ANLALDGGDN LTYIAPTMVN LNLAKERFPD IDFRATREH
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