| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002617 |
|---|
| Symbol | |
|---|
| ID | 8556345 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Vibrio sp. Ex25 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013456 |
|---|
| Strand | - |
|---|
| Start bp | 1127246 |
|---|
| End bp | 1128136 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 646405708 |
|---|
| Product | putative protease |
|---|
| Protein accession | YP_003285244 |
|---|
| Protein GI | 262393390 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0826] Collagenase and related proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.883659 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATAACT CAATGAAATA CGCACTTGGC CCACTACTCT ATTTTTGGCC AAAACAAGAT
GTAGAAGCCT TCTACCAACA AGCAAAACAA AGCTCTGCAG ACATTATTTA CCTGGGTGAA
TCGGTTTGCT CTAAACGCAG AGAAATGAAA TCAGCCCACT GGTTGGAAAT CGCTAAAGAC
TTATCTGCTT CTGGCAAGCA AGTCGTTATC TCTACGATGG CGCTACTGGA AGCACCGAGT
GAAGTAAACA TCATGAAGAA GTACATCAAT AACGGTGACT TCGCCATTGA GGCTAATGAC
GTATCGGCGG TTCAATTAGC ATCAGAGCAT AAAGTGCCTT TCGTCGTTGG TCCTGCAATC
AATACTTATA ACGCACACAC GCTCAACTTA TTTTTGAAGC AAGGTATGGT TCGCTGGTGT
ATGCCTGTCG AGCTCTCTCG CGAATGGTTA AACGATACTT TAGTTCAGTG TGACGAGCTT
GGTATTCGTA ACAAGTTTGA AGTTGAGGTA TTTAGCCACG GTTATTTACC TTTAGCGTAT
TCCGCTCGCT GTTTCACAGC CCGAGCTGAA AACCGAGCGA AAGACGATTG CGAAACCTGC
TGTATCAAAT ACCCAACAGG AATCCAGGTC AGTAGCCAAG AAGGGCAAGA AGTCTTTAAC
CTTAACGGTA TTCAAACACA ATCAGGGTAT TGTTATAACC TGATCAATGA CTTACCAAGC
ATGCAAGGGC TGGTTGATGT GGTCCGCTTA AGCCCTCTCG GTGTGAGTAC ACTTTCTGAG
TTAGAGCATT TTCGCTCAAA CGAGCATGGC GACAACCCTG AAAAACTCGA AAGCCGCCAA
TGCAATGGCT ATTGGCATCA GCTAGCTGGC TTAGAAGTAA AAAACATTTA G
|
|---|
| Protein sequence | MDNSMKYALG PLLYFWPKQD VEAFYQQAKQ SSADIIYLGE SVCSKRREMK SAHWLEIAKD
LSASGKQVVI STMALLEAPS EVNIMKKYIN NGDFAIEAND VSAVQLASEH KVPFVVGPAI
NTYNAHTLNL FLKQGMVRWC MPVELSREWL NDTLVQCDEL GIRNKFEVEV FSHGYLPLAY
SARCFTARAE NRAKDDCETC CIKYPTGIQV SSQEGQEVFN LNGIQTQSGY CYNLINDLPS
MQGLVDVVRL SPLGVSTLSE LEHFRSNEHG DNPEKLESRQ CNGYWHQLAG LEVKNI
|
|---|
| |