| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002608 |
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| Symbol | |
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| ID | 8556336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 1115580 |
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| End bp | 1117067 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 646405699 |
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| Product | transcription termination protein NusA |
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| Protein accession | YP_003285235 |
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| Protein GI | 262393381 |
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| COG category | [K] Transcription |
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| COG ID | [COG0195] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01953] transcription termination factor NusA
[TIGR01954] transcription termination factor NusA, C-terminal duplication |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000346209 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTAAAG AAATTTTAGC GGTAGCAGAA GCGGTATCGA ACGAAAAAGC GGTACCTCGT
GAGCGTATCT TTGAGGCTCT TGAGATTGCT CTAGCAACTT CTACAAAGAA AAAATACGAA
ATCGAAATCG ACGTACGTGT TGCCATTGAC CGTAAAACTG GTGAGTTTGT GACTTACCGT
CGTTGGTTAG TTGTTGATGA TGTTGAGAAC CCTACAAAAG AGATCTCACT AGAAGCAGCA
CAGTACGAAG ATGACTCAAT CGAGCTTGGC GACTACGTAG AAGACGAAAT CGAATCAGTA
ACGTTTGACC GTATTACGAC TCAAACGGCT AAGCAAGTTA TCGTACAAAA AGTTCGTGAA
GCTGAACGTG CACAAATCGT TGAGCAGTTC ATCGACAATG AAGGTGATCT AATCACTGGC
GTAGTGAAAA AAGTAAACCG CGACACAATC GTACTTGACC TTGGTAACAA CGCTGAAGCG
GTAATCCTAC GTGATGACCA ACTTCCTCGT GAAAACTTCC GTCCAGGCGA CCGCGTTCGT
GGTCTTCTTT ACAAAGTCGC GCCAGAAGCA CGTGGTTTCC AACTGTTCAT CACTCGTTCT
AAGCCTGAAA TGCTGGCAGA ACTATTCCGT GTTGAAGTGC CTGAAATCGC TGAAGATATT
ATCGAGTTGA AAGGCGCGGC ACGTGATCCT GGTTCTCGCG CTAAGATCGC TGTCAAAACA
AATGACAAAC GTATCGACCC TGTAGGTGCG TGTGTTGGTA TGCGTGGTGC ACGTGTACAA
GCTGTTTCTG GCGAACTTGG TGGTGAGCGT ATCGATATTG TGCTTTGGGA TGATAACCCA
GCTCAATTCG TTATCAACGC AATGGCGCCA GCTGATGTTG CTTCTATCAT CGTTGATGAG
GATGCACACT CAATGGACAT CGCAGTTGAA GCTGACAACC TAGCGCAAGC TATCGGTCGT
AATGGTCAAA ACGTGCGTCT AGCATCTCAA CTAACAGGTT GGGAACTGAA TGTTATGACA
GTTGCTGATC TTCAGAAGAA ACACGCTGAA GAATCACAAG CATCTATTGA AAACTTCATG
AAGTACCTAG ATATTGAAGA AGACTTCGCT CAACTTCTTG TTGAAGAAGG TTTCTCAACG
CTAGAAGAAA TCGCATACGT GCCAGTTAAC GAGCTACTAG AAATCGATGG TTTGAATGAA
GAGCTAATCG AAGAGCTTCG TGGACGTGCA AAAGATGCAC TAACGACGAT CGCACTAGCA
CAAGAAGAGT CTTTTGAAGG TCTAGAACCA GCTGAAGATC TGCTTGCACT TGAAGGTCTT
GAGCGTGAGA TGGCATTTAA ATTGGCAGCG AAAGGTGTAG CGACACTGGA AGATCTTGCT
GACCAAGGTA TTGACGATTT AGAAGGTATC GAAGGCCTGA CCGAAGAACG TGCAGGTGAG
CTAATTATGG CCGCACGTAA CATCTGTTGG TTCGGCGAAG AAGCATAA
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| Protein sequence | MSKEILAVAE AVSNEKAVPR ERIFEALEIA LATSTKKKYE IEIDVRVAID RKTGEFVTYR
RWLVVDDVEN PTKEISLEAA QYEDDSIELG DYVEDEIESV TFDRITTQTA KQVIVQKVRE
AERAQIVEQF IDNEGDLITG VVKKVNRDTI VLDLGNNAEA VILRDDQLPR ENFRPGDRVR
GLLYKVAPEA RGFQLFITRS KPEMLAELFR VEVPEIAEDI IELKGAARDP GSRAKIAVKT
NDKRIDPVGA CVGMRGARVQ AVSGELGGER IDIVLWDDNP AQFVINAMAP ADVASIIVDE
DAHSMDIAVE ADNLAQAIGR NGQNVRLASQ LTGWELNVMT VADLQKKHAE ESQASIENFM
KYLDIEEDFA QLLVEEGFST LEEIAYVPVN ELLEIDGLNE ELIEELRGRA KDALTTIALA
QEESFEGLEP AEDLLALEGL EREMAFKLAA KGVATLEDLA DQGIDDLEGI EGLTEERAGE
LIMAARNICW FGEEA
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