Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_002600 |
Symbol | |
ID | 8556326 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | + |
Start bp | 1108124 |
End bp | 1108597 |
Gene Length | 474 bp |
Protein Length | 157 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 646405689 |
Product | transcription elongation factor GreA |
Protein accession | YP_003285227 |
Protein GI | 262393373 |
COG category | [K] Transcription |
COG ID | [COG0782] Transcription elongation factor |
TIGRFAM ID | [TIGR01462] transcription elongation factor GreA |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.000901215 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAAG TTCCAATGAC ACTACGTGGC GAGCAAAAGC TACGTGCAGA ACTCGATCGT CTACTTAAAC TACGTCCTCA AATTTCAGAG GCAATCGCTG AAGCTCGTGA GTTAGGTGAT TTAAAAGAGA ACGCAGAATA TCACGCCGCT CGAGAAGAGC AGGGTATCTG TGAAGCACAA ATCCGTGACA TTGAATACAA ACTGTCAGTT GCTCAAGTAA TTGATGTAAC GAAGATGGAG AACACGGGTA AAGTTATTTT TGGTTCAACC GTAACCTTGA TTGACATCGA CACCGAAGAA GAAAAAACAT ACCAAATTGT TGGTGATGAC GAAGCAGACA TTAAAGCTGG CCGTATTTCA GTAAGCTCAC CAATTGCTCG TGGCTTGATC GGTAAGATGG AAGGCGATGA GGTTGCTATT CAAACTCCGG GTGGCGCGAA AGACTTCGAA ATCGATCGAG TAGAATACAT CTAA
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Protein sequence | MEKVPMTLRG EQKLRAELDR LLKLRPQISE AIAEARELGD LKENAEYHAA REEQGICEAQ IRDIEYKLSV AQVIDVTKME NTGKVIFGST VTLIDIDTEE EKTYQIVGDD EADIKAGRIS VSSPIARGLI GKMEGDEVAI QTPGGAKDFE IDRVEYI
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