Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | VEA_002596 |
Symbol | |
ID | 8556322 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Vibrio sp. Ex25 |
Kingdom | Bacteria |
Replicon accession | NC_013456 |
Strand | + |
Start bp | 1102531 |
End bp | 1103718 |
Gene Length | 1188 bp |
Protein Length | 395 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 646405685 |
Product | tyrosyl-tRNA synthetase |
Protein accession | YP_003285223 |
Protein GI | 262393369 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0162] Tyrosyl-tRNA synthetase |
TIGRFAM ID | [TIGR00234] tyrosyl-tRNA synthetase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000034927 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCGAGCA TTGAAGCTGC ACTAGCCGAG ATTAAGCGCG GTGTTGAAGA GCTGATTCCA GAAGAAGAGC TTATCGCAAA ACTAAAAGAA GACCGTCCTC TACGTATTAA ATTGGGTGCG GATCCTACGG CTCCAGATAT TCACCTAGGT CATACGGTTA TTTTCAATAA GCTTCGCTTG TTCCAAGAGC TAGGTCATGA GGTGACGTTC CTAATTGGTG ACTTCACTGC AATGGTTGGT GACCCAACAG GTAAAAACAC AACACGTCCA CCGCTAAGCC GCGAAGACGT ATTGCGTAAT GCAGAAACTT ACAAAGAGCA GGTATTCAAA ATTCTAGACC CTGCAAAAAC TAAGATTCAG TTCAACTCTG AGTGGTTATC TGAGCTTGGT GCAGAAGGTA TGATTCGTCT TGCTGCAAAC CAAACCGTTG CTCGTATGCT AGAGCGTGAT GACTTTAAAA AGCGTTACGC GGGTGGTCAG CCAATTGCTA TTCATGAGTT CATGTACCCA CTTCTACAAG GTTGGGACTC AGTAGCAATG GAAACTGACG TTGAGCTTGG TGGTACTGAC CAGAAGTTCA ACCTGCTAAT GGGGCGTGAA CTGCAAAAGT CTCACGGTCA AAAACCACAG GTTGTACTGA TGATGCCTCT TCTAGTGGGC CTTGATGGCG AGAAGAAGAT GTCTAAGTCA GCAAACAACT ACATCGGTAT CAGCGAAGCG CCAAGCGAAA TGTTTGGTAA AATCATGTCT ATTTCTGATG ACCTAATGTG GAGCTACTAC GAGCTGCTAT CTTTCCGCCC TCTGGAAGAG ATTGCTCAAT TCAAAGCTGA TGTAGAAGCG GGCAAAAACC CTCGTGACAT CAAAGTATTG CTAGCAAAAG AAATTATTGC TCGTTTCCAC AGTGAAGCTG ATGCAGATGC GGCAGAGCAA GAATTCGTAA ACCGTTTTGC GAAGAACCAA ATTCCTGATG AAATGCCAGA ATTTGATTTT GATGCAGGTC GCCCAGTGAG CAATCTGTTG AAAGAAGCTG GCTTATGCCC ATCATCGTCA GATGCGATGC GTATGGTTAA GCAGGGCGCT GTGAAGATGG ATGGTGAAAA AATTGCGGAC AGCAAATTTG CTCCAGAAGC GGGTACTTAC GTGTTCCAAG TAGGCAAACG TAAATTTGCA CGTATTACTA TTCAGTAA
|
Protein sequence | MASIEAALAE IKRGVEELIP EEELIAKLKE DRPLRIKLGA DPTAPDIHLG HTVIFNKLRL FQELGHEVTF LIGDFTAMVG DPTGKNTTRP PLSREDVLRN AETYKEQVFK ILDPAKTKIQ FNSEWLSELG AEGMIRLAAN QTVARMLERD DFKKRYAGGQ PIAIHEFMYP LLQGWDSVAM ETDVELGGTD QKFNLLMGRE LQKSHGQKPQ VVLMMPLLVG LDGEKKMSKS ANNYIGISEA PSEMFGKIMS ISDDLMWSYY ELLSFRPLEE IAQFKADVEA GKNPRDIKVL LAKEIIARFH SEADADAAEQ EFVNRFAKNQ IPDEMPEFDF DAGRPVSNLL KEAGLCPSSS DAMRMVKQGA VKMDGEKIAD SKFAPEAGTY VFQVGKRKFA RITIQ
|
| |