| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002593 |
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| Symbol | |
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| ID | 8556319 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 1096801 |
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| End bp | 1097919 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 646405682 |
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| Product | membrane-fusion protein |
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| Protein accession | YP_003285220 |
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| Protein GI | 262393366 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00429247 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGGAT CGTCTTTCGG ACGTCGCATT GTCGAGCGCC CGTGGCTAGT ATCTCTTATC
CTCATATTGC TTCTTGTTGC ATGGTTGGCA ATCGGTCAAC TGAAAGCACA AGATGATAAT
CTCAATTCTT CATCCTCTTC AACGAACACC ACGCCACTTG CAAAGGTGAT GTTCGACACC
TTTATTGCTG AACCCACAAG TAAAACCATC GAACTGTATG GGCGGACTGC ACCCAATCGT
CAAGCGCGCC TTGGCGCTGA AGTCGCCGGT AAAATAGTCA GCCTCAGTAT AGAAAAAGGT
CAAACAGTCA AGCAGGGGCA AGTGATTGCA AGCATCGACA AGCGCGATCT TGGTATTCAG
CTCAAGCGGG CTCAGGCGAT GCTGTTGGTT AAAGAGAAAG AGTTTAATGC AGCTAAATCG
CTAAAAAGTC GCGGACTACA GGGCGAAGTT GCGTTTGCGA CAGCACAAGC GGCATTGGTG
GATGCACGTG CGAATTTGAG TAACGTGCAA ACGGCTTTAA GAAATACTGA GGTGAAAGCG
CCATTCGATG GCATTGTAGA TCACCACTTT GTTGAGTTAG GTGATTTTGT CGGGATTGGC
GATCCTATTG CGACGGTCAT TGATTTGGAT ACTTTAGTGA TTGAAGCTGA TGTCAGTGAA
CGGCATATAC AATACCTTAA GGAAGGCCTA GAAGCCGACG TAAGAACCAT TAACCAACAG
CATCATCAAG GTCATGTGCG CTACATTGGA CGTGTTTCTT CTGCTTCTAC TAATACATTT
CCAATTGAAA TCGAAATTGA TAATCAAGAC GCAAGAATTC CGGCCGGTAT GAGCGCTGAA
GTACAGTTGC CGTTGAGTAA AGTGTTAGCG GTAAAGATTA CGGCTGCAAT GCTAGCACTC
GATGAAGAAG GTAATTTAGG TGTTAAAACA CTGCGTAATG AGCATGTGGA ATTTGTTCCG
ATTCAGCTTG TTAAGGCCGA GGATGATGGC GTTTGGCTCT CTGGGTTAGG AGAGCGAGCC
GATATTATCG TGCTGGGGCA AGGGTTTGTT CGCGATGGCG ATCAAGTACT GGCCAACAAA
GTTGATGACG TAGTTGTTGA AGCGGCTAGT GAGCAGTAA
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| Protein sequence | MSGSSFGRRI VERPWLVSLI LILLLVAWLA IGQLKAQDDN LNSSSSSTNT TPLAKVMFDT
FIAEPTSKTI ELYGRTAPNR QARLGAEVAG KIVSLSIEKG QTVKQGQVIA SIDKRDLGIQ
LKRAQAMLLV KEKEFNAAKS LKSRGLQGEV AFATAQAALV DARANLSNVQ TALRNTEVKA
PFDGIVDHHF VELGDFVGIG DPIATVIDLD TLVIEADVSE RHIQYLKEGL EADVRTINQQ
HHQGHVRYIG RVSSASTNTF PIEIEIDNQD ARIPAGMSAE VQLPLSKVLA VKITAAMLAL
DEEGNLGVKT LRNEHVEFVP IQLVKAEDDG VWLSGLGERA DIIVLGQGFV RDGDQVLANK
VDDVVVEAAS EQ
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