| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002568 |
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| Symbol | |
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| ID | 8556294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | + |
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| Start bp | 1059339 |
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| End bp | 1061711 |
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| Gene Length | 2373 bp |
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| Protein Length | 790 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 646405657 |
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| Product | multimodular transpeptidase-transglycosylase |
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| Protein accession | YP_003285195 |
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| Protein GI | 262393341 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0744] Membrane carboxypeptidase (penicillin-binding protein) |
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| TIGRFAM ID | [TIGR02071] penicillin-binding protein 1B |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTAACA GCAAGAAGCC TAGCGCGAAA AAAGCGCCAG CGAAGAAAAG TACAACCAAT
AAAGGAACGA CAAAACCGAC TCGACGCACA CCGAGTAAAA AGCCGGCTAA CGAGAAACGT
TCGTGGCTGA AAGTTTTGTG GTCATTTAGC TGGAAAGCCG GTGTTGCGCT TGCCGCTGTT
TTGCTGTTTG TAGGTATTTA TTTAGACAGT GTCGTGAAAG AGCGCTTTGA AGGTCAGCTG
TTTGAACTGC CAACGGTGGT TTATGCTCGC ATCTTGAACT TAAATCCGGG TGAAAATATC
ACCATTCAAG AACTTCGTAA CGAGCTGGAT GTACTGAATT ACCGTAAGGT AAGTCAGCCT
CGCTATCCTG GTGAGTACTC ATCTTCTTAC ACTCGTATTG AGCTGATCCG TCGTCCATTT
GAATTTGCCG ATGGTCCTGA ACCGGATCGT CACGTGATGC TCCATTTTTC AGATTCTGGC
TTACAGCGTA TTCAGTCTTT AGAGTCCCGA GGTGATCTTG GTTACTTACG CTTAGAGCCT
AAGATGTTGG GTATGCTGGA GAAAGATCAA GATGAGCAGC GTCTGTTCTT GCGTCGTGAT
CAGTTCCCAG AAATTTTAGT TGATGCACTG CTTGCGACCG AAGACCGGGA TTTTTATCAA
CACGATGGGG TGTCTCCACT CGCGATTGCA CGAGCAATGG TTGCAAACAT TAAAGCGGGT
CGTACTGTTC AAGGCGGTAG TACGCTAACT CAGCAGTTGG CGAAAAACCT GTTTTTGACC
CGTGATAAGA CGCTGTGGCG CAAAGTTAGA GAAGCGTATA TTGCGTTAAT TTTGGATTAC
CGTTACAGCA AAGATCGTAT TTTGGAAGCC TACCTTAACG AAGTGTATCT AGGGCAAAGT
GGTGGTGAAG CGATCCACGG GTTTGGCTTG GCATCGCGTT ATTACTTTGG ACAACCGATC
CAAGAGCTGC GAATCGATCA ACTGGCGATG TTAGTTGGGA TGGTAAAAGG ACCGTCTTAC
TACAACCCAA TTCGTTACCC CGAGCGCACG AAAGAGCGCC GCGATCTTGT ATTACGTTTG
TTGATGCAGC AAAACATGCT GACTTCAGAG CAGTATGAGC AAGCCGTCAG TCGTTCGCTT
GATACGCAGA GCAAACCACG TATCGCGAGC CGTCAGCCCG CTTATTTCCA GCAATTGAGC
ATTGAATTGA AAGAAAAAGT GGGGGAGCGA TTTAAAGCGG AAACCGGGCT GCGCGTGTTT
ACGTCTCTGG ATCCGGTATC GCAAAGCAAA ATGGAGCAAG CCATCGCGAA AAAGATCCCG
GAGCTAGCTA AACGAGGCGG TAAAGAATTG GAAGCTGCCG CTGTTGCGGT TGATCGTCAT
AGTGGTGAAA TCCGTGCCAT GGTTGGCGGT AAACGTGTTG GTTATGAAGG TTTTAACCGC
GCGCTCAATG CCAGTCGTCC AATTGGTTCT CTAGTTAAAC CAGCGATTTA CTTGACGGCT
TTAGAACAAC CGGAAAAATA TAACCTAGGC ACGACGCTGC ACGACACGCC GCTAAGCCTG
AAAAGCAGTA AAGGTAATGT ATGGACACCG CGTAACTACG ACCGAAAATA CCGTGGTGAT
GTGCCACTCT ACATTGCTTT AGCGAAGTCA CTCAACGTGC CAACGGTGCG CTTAGGCATG
GCGCTTGGTA TCCCAGAAGT ATCCGATACT TTAGAGCGTT TGGGCGTCAA CAAAGACGAA
ATCCGCCCAG TGCCTTCGAT GTTTTTGGGC TCGTTTTCTT TGACGCCGTT TGAAGTCGCG
CAGATGTATC AGACACTGAC GAACTCAGGC AAACGTGCGA AACTGACCGC TCTGCGTTCA
GTGATGGATA TGGAAGGTAA TGTGCTTTAT CAATCCTTGC CTCGTTCATC AAGAGCCGTG
GATGAGCAAG CAGCATGGCT AACGACCTAC GCGATGAAAC AGGGGGTTGC TCAAGGTACA
GGCCGCTTCT TACAAAGCCA GTTTGGTTGG GCTGCACTGG CAGGAAAAAC GGGTACCAGT
AACGATAACC GCGATAGCTG GTTTGTCGGT GTTGATGGCC GTGAAGTGAC GACAATTTGG
CTAGGTCGCG ACGATAACAA ACCGGTTCAT CTAACGGGAT CGAGCGGTGC ATTACGAGTG
TACGCAGAGT ATTTGAAGCA ACGCATTCCT GAGCGTTTAG AGCTTCCATG GCCAAGAGAG
ATCACCACGT TAGGATTTAA GCCGACATCA GATGGTGGTT TAGAAATGAA CTGTCGTAGT
GATTATAAAC TGCCAGTTTG GGATAAAACG GGTCAAATAA AGCAGCAGTG TGAGAAGAAA
TCAAACTGGC TTAACAGCTT ATTTGATTGG TAG
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| Protein sequence | MTNSKKPSAK KAPAKKSTTN KGTTKPTRRT PSKKPANEKR SWLKVLWSFS WKAGVALAAV
LLFVGIYLDS VVKERFEGQL FELPTVVYAR ILNLNPGENI TIQELRNELD VLNYRKVSQP
RYPGEYSSSY TRIELIRRPF EFADGPEPDR HVMLHFSDSG LQRIQSLESR GDLGYLRLEP
KMLGMLEKDQ DEQRLFLRRD QFPEILVDAL LATEDRDFYQ HDGVSPLAIA RAMVANIKAG
RTVQGGSTLT QQLAKNLFLT RDKTLWRKVR EAYIALILDY RYSKDRILEA YLNEVYLGQS
GGEAIHGFGL ASRYYFGQPI QELRIDQLAM LVGMVKGPSY YNPIRYPERT KERRDLVLRL
LMQQNMLTSE QYEQAVSRSL DTQSKPRIAS RQPAYFQQLS IELKEKVGER FKAETGLRVF
TSLDPVSQSK MEQAIAKKIP ELAKRGGKEL EAAAVAVDRH SGEIRAMVGG KRVGYEGFNR
ALNASRPIGS LVKPAIYLTA LEQPEKYNLG TTLHDTPLSL KSSKGNVWTP RNYDRKYRGD
VPLYIALAKS LNVPTVRLGM ALGIPEVSDT LERLGVNKDE IRPVPSMFLG SFSLTPFEVA
QMYQTLTNSG KRAKLTALRS VMDMEGNVLY QSLPRSSRAV DEQAAWLTTY AMKQGVAQGT
GRFLQSQFGW AALAGKTGTS NDNRDSWFVG VDGREVTTIW LGRDDNKPVH LTGSSGALRV
YAEYLKQRIP ERLELPWPRE ITTLGFKPTS DGGLEMNCRS DYKLPVWDKT GQIKQQCEKK
SNWLNSLFDW
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