| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | VEA_002546 |
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| Symbol | |
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| ID | 8556272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Vibrio sp. Ex25 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013456 |
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| Strand | - |
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| Start bp | 1033747 |
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| End bp | 1034220 |
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| Gene Length | 474 bp |
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| Protein Length | 157 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 646405635 |
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| Product | type IV pilin PilA |
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| Protein accession | YP_003285173 |
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| Protein GI | 262393319 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4969] Tfp pilus assembly protein, major pilin PilA |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.790868 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAACA GTAAACAAAA AAAACAACAG GGTTTTACTC TGATTGAATT AATGATTGTG
GTGGCGATTA TTGGCATCTT ATCTGCTTTC GCAGTTCCTG CTTACCAAAA TTATACTAAG
AAAGCGACAT TGTCAGAATT TCCAAAAGCA GCTGCGGCAG CCAAATTAGC AGTAGAATTA
TGTGCCCATG AGAATGCCTC AAATGAAACA ACATTTATTA GTGAATGTGT AAAGGAAGAA
AATGGAATTC CCGCTAAATT CGTTTTGAAT AATATAGAAA TTAGCGTTGT TAAAGCCACA
GATGCTAGCG TTTCTGGTGC GATAGCAGTT ATTGCCGCAG CTGATAAAGT TAAGGGACCT
ATTGCTAAAG GCGAGCAATA TATCATGGCT GCATCATATA AAACTCAAGG CTTAGAGTGG
GGGGCTTCAT GTAAAGCTGG CGGTAAAGCA CAAACAGACT ACTGCCCAAA CTAA
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| Protein sequence | MKNSKQKKQQ GFTLIELMIV VAIIGILSAF AVPAYQNYTK KATLSEFPKA AAAAKLAVEL
CAHENASNET TFISECVKEE NGIPAKFVLN NIEISVVKAT DASVSGAIAV IAAADKVKGP
IAKGEQYIMA ASYKTQGLEW GASCKAGGKA QTDYCPN
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